Viruses: 80541658
Help
Entry
80541658 CDS
T40000
Symbol
QKU39_gp5
Name
(RefSeq) Rhabdoviridae sp.; RNA-dependent RNA polymerase
Virus
1955137
Rhabdoviridae sp.
Taxonomy
SSDB
Ortholog
Paralog
GFIT
Vog
Vog cluster
Motif
Pfam:
Mononeg_RNA_pol
Methyltrans_Mon_2nd
Mononeg_mRNAcap
Methyltrans_Mon_1st
Methyltrans_Mon_3rd
Motif
Other DBs
NCBI-GeneID:
80541658
NCBI-ProteinID:
YP_010802855
RS:
NC_077058
LinkDB
All DBs
Position
NC_077058:4343..>10660
Genome browser
AA seq
2106 aa
AA seq
DB search
MDLFTDDWDCSLDQCPDYLLEVDPLDDLDIGMGGGVELPNFDYNLNSPLIRDEVDEFVAS
LRQGFTSSRYKGKWNFEEGLKWFRSLGVIWGTTLGSWGFHEWVFSQVIPMKIRSLSCKEE
IKWICEFLDAPTQVMNDYLSHVLQCEVDFPLRMVSKEQILHHDLMIDTVNQIQLYNIFHW
VINLLNSSNKDARQEISKVSPFVFKLTKEAPKKNSFLVAIHVAEMGYIWITTGFVYFQKW
NRILDRNMCLMIKDLLGARVCSRLSLYRGDNDLSRDLVISKLDTLYNLGDCIFRLTGNYG
YDLIKLVEGLCNLRFIELAHQFRNKIPMDNNFRRHITGSVSEFELLHNVDCQDFCRQILQ
EEDPIQVAIYYGSFRHWGHPFLDYFEGLSKLHEQVTKDSVVDEQYAKLLASDLAFKVLSA
EFHKQKRWFVDSNLVDRTHPLYDHFINQTWPTKKQILDYGDHWDELPLMQCYEIPKGLDP
ALLYADKSHSMNLSEVRQHLQSHPGSPIPSKKVLHTALFEGDLDVPAFLTAINTNGLDTD
SLIIGLKGKEREVKRIGRFFSLMSWNLRLYFVITEYLIKKHFVPLFNGLTMADDYNSVIK
KLLDRTIGQGESSYKRVTFANHFDYSKWNNTQRGKANNPTFTVMGQFFGLKNLFVRTHEF
FERSFIYYNDRGDLLTCIGDRIENHSGHKICWQGQLGGLEGLRQKGWTVVSLLVIERESK
VRNTLTKVLAQGDNQVVCTYYELPSDVDHQIVDAEIPNITQNNARIVSAISGGTRKLGLQ
VNLDETLISPDYLNYGKVILFRGKMLPLTTKRWSRVTCITNDQIPSLGNIMSAVSANALT
VTQQSDHFIDSILNYLFFGAFCLYSIFKYHPILGSGIAQQPLNQMDQFTRMRMSINLLFL
DPSLGGLSGTSLNRFLIRQFPDPVTESLSFWKIVHDQTQSVHIQRICVLNGNPPLGRLTS
LSILKLLENPMGLNLPKGLNCITLLRDAVREQLTNSVDSIQNLLFRESIRYLRDQEQDLL
DFLMSINPLFPRFLSEFRAGTFLGITESMVGLFQNSRTIRMVFKKRFASTVSELMIEYER
KNIRGILAPSFDYVGTIWKCSSEQADLLREMSWGREVVGTTIPHPSELLGRISPGHGGCL
ECSCAPYPGSYISVIYPHGLAHDSCSKGPLPPYLGSKTHESTSLFQPWEKEIDVPLLVKS
VRLRNAIQWFVPQSSNLSTSILNNLSAMTGLDWNEGEISFRRTGSAIHRFSCSRQSAGVY
SSVNPNLLAYTFVTSDTLGEMNTVNHDFMYQSLLIYSQIVSVVHNVLQHTSISHHFHIKC
SQCVREIDDINLESDLIYTPSSTAHLLKLISGSDFVWRPTGKTINLNAGNWGSLSPAEQS
FQIGTTQGLIFSISVVNNESHSCDHTLFPESVARYVHTKSYLLGLLRGLIGGSTYMSIYH
RDIYDPKRPIKIIHGALEYLLTRLLDSPHFIPSLSTWDLRWLTQGIPHRIPPSYPSSKKD
LGATLLAFFHHHLGKETLKGRLCRTWSNRLWIFSDFRTTKWIGLLLCANYTYSLYYAAVL
STPQINKLREVKDLIYYFLSSGNHSDSAISLTPHSQIRLKKIVAQAYGCPYEIRFAVKGL
VQQVPRLAPPLSPDVSEWSDEYVPKCSRIIVTCSNLRPNYKEHVVKQGYINDPLISGLRL
AQLATGAHYKIRGILRYLQQFDDVLCGGDGSGGMSAAILRFSPNSKLIFNSLMQPTGESF
MGVTPAGPAAITAMPSSIRSRCVNLESCWGDPSDLTSPLTWRNFLYLRNTHHLKINLVVL
DMEVTTLNHFYQILTQLRQHLHELVESDGQVVVKCYASHLSNDEYIDSLSGLCRLFQHIE
SYTSMMSSSFTSEFYLVCKNLITDEHQGLFIDAESVHSICISSPSNRSVRDEFLRALKLK
KANLLKGVPPHLIPKVEDELFAVLTHIGVETGTSRLITRRIESEVSSANIITYILVILII
GSNSIINTTEEHMSPRNYPSFASLQYHYALFVGCWMSISWIVEDLTLYQTLHWWIQNKVY
YGFVQRLRQNGLNLIWKWNAGAVGKKLYKPSRLALSSQLIRLFTRLSKHVDTGFDLNKTV
VRATGY
NT seq
6318 nt
NT seq
+upstream
nt +downstream
nt
atggatttgtttaccgacgattgggattgctccttggatcagtgtccggattacctgctt
gaggtagatccgttagacgacttagatataggaatgggaggcggggtggagcttccaaac
tttgattacaacttgaattcccctctaatccgagacgaggtagatgaatttgtcgccagt
ctgcgacagggatttacctcttctcgttataaagggaagtggaacttcgaagagggattg
aaatggtttcgaagtcttggggttatttgggggacaacattgggatcttgggggtttcat
gaatgggtcttctcccaagtgattccgatgaaaattcgatcactcagttgcaaggaagag
atcaaatggatctgtgaatttcttgatgcacctactcaggtgatgaatgattatttaagt
catgtattgcaatgtgaagtagatttcccattgcgaatggtgagcaaggagcagatcctc
catcatgacctaatgattgacacagtgaaccagatccagctatataacatcttccactgg
gtgattaacctcctaaatagtagtaacaaggatgcacgtcaagagatcagtaaggtgtct
ccttttgttttcaagttgaccaaggaggcgcccaagaagaactccttcctagtggcaatt
cacgttgctgagatggggtacatatggataacaaccgggttcgtctactttcagaagtgg
aatcgaatccttgatagaaatatgtgcctcatgatcaaggatctactaggagcaagagtc
tgcagtcggctgtcactttataggggagacaatgatctaagtagagacttagtcatctca
aagctagacaccctgtacaacctaggcgattgcatctttcgcctcacaggaaactatggg
tacgaccttatcaaattggttgagggattgtgtaacctgcggtttatcgaactggcccac
cagtttagaaataaaattccaatggacaacaatttccggaggcacataacgggctcagtg
agtgaatttgaactactacataatgttgactgccaagacttttgccgacaaatcttgcaa
gaagaggatccgatccaggtagctatttactatggctcctttagacactgggggcatcct
tttttagattactttgaaggactttctaaactccatgaacaagtcaccaaggactccgtt
gtggacgagcagtacgctaaattgttggccagtgatctggcatttaaagtcctttcagcg
gagtttcacaagcagaaacggtggttcgtagattctaatttagtagatcgaacccatcct
ttgtatgatcacttcataaatcagacatggcccaccaagaaacaaatcctcgactacggg
gaccactgggacgaattaccgctgatgcaatgctatgagattcctaagggcctggatcca
gctctcctctatgcagataagagtcactcaatgaacttgagtgaggtcagacaacatctc
cagagccatccagggtcccccattccttccaaaaaggtccttcatacagcattatttgaa
ggagatttagatgtacctgcctttttaaccgcaatcaacacaaacgggttggatacagac
agtctcatcataggtctcaaagggaaagaaagagaagtgaagaggatcggtcggttcttc
tccctgatgtcctggaacctccgactctacttcgtcataacagaatacctcatcaaaaaa
cattttgttccactatttaatggactgactatggcagatgactataattccgtaataaag
aaattgttagatagaaccataggtcaaggggaatcatcttacaagagagttacattcgcc
aatcacttcgattattccaagtggaacaacacccagcgggggaaagctaacaacccaacc
ttcacggttatgggacagttttttggtctgaaaaacctctttgtaaggacacacgagttt
tttgaaagaagtttcatctactacaacgaccgcggcgacttactaacctgtataggcgat
cgaattgagaatcattcagggcataaaatttgttggcaaggtcaacttggtggtcttgag
ggattgaggcaaaagggttggactgtagtgagcttactggtaattgagagggaaagtaaa
gtccgcaatactctgactaaagttttagctcagggagacaatcaagtggtctgcacctac
tacgagctcccctcggatgttgatcaccaaattgtggatgcggagattcctaatattacc
cagaacaatgcaagaattgtatcagcaatcagtggtgggacaaggaagttgggtctgcaa
gtgaatctcgatgagacacttattagcccggattatttgaattatgggaaagttatattg
tttagaggtaagatgctgccgttaactaccaagcggtggtccagagtgacatgcataaca
aacgatcaaattccctctctcgggaacatcatgagtgctgtgtcagcaaatgctctaaca
gtgactcaacagtcagatcatttcatcgattccatcttgaactatctcttttttggggcc
ttctgcttatacagtattttcaaataccatcccatacttgggtcagggattgctcaacaa
cctctcaaccaaatggatcaatttacgagaatgcgcatgagtatcaatctacttttcttg
gatccatcactgggtgggttatcaggtacttccctaaacagatttctgatccgtcaattc
cctgatcccgttactgaatccttgagcttttggaaaattgtccatgatcaaacccaatcc
gtacatatacaacgtatctgtgtgctaaacgggaatcctcctctaggtaggttgaccagt
ttgagcatcttaaaactgctcgagaaccccatgggtttaaacctccccaaaggtctcaac
tgtattactctcctaagggatgctgtacgagagcaattaactaattctgtcgattcgatt
caaaacctgctattccgagaatcaatccgatatttgagggatcaagaacaagatttgcta
gacttcttgatgtccatcaacccgctgttcccccgatttttgagtgaatttagggcaggg
acatttctcggaatcacagaatccatggtcggcttgtttcagaattcacgcaccatcaga
atggttttcaagaaacgattcgcatctacagtgtctgaattgatgatcgagtatgagagg
aaaaacatccgtggcattttggccccttcgtttgattatgtcggaaccatatggaaatgc
tcatctgagcaagcagatttgttgcgtgaaatgtcatgggggagagaagtggtagggaca
acaattccccatcccagtgagttgcttggtagaatcagccctggacatgggggctgcctg
gagtgttcttgtgctccttacccgggctcatatatttctgtgatttatccccatggactt
gcacacgattcctgctcaaaagggcctctgcctccttacttgggatcaaagacccatgag
tcgacttctttgttccaaccctgggagaaggagattgatgtcccattactggtcaagtct
gttcgcttgagaaatgcaattcaatggtttgttcctcaatcaagcaatttaagcacctct
attttgaacaacttgtccgctatgaccggattggattggaacgagggagagatatctttt
aggcgaactggttcggccatccatagatttagttgttccaggcaaagtgcaggtgtgtat
tccagtgttaaccccaacctgctagcttacacttttgtgacctctgacactctaggggaa
atgaatacagtcaatcatgatttcatgtaccaatctttgttaatctatagtcagatcgta
agtgtggttcacaatgttttgcaacatacaagtatatcacatcactttcatattaagtgt
tcccaatgtgttagagaaatcgacgacatcaatcttgaatcagatcttatttatacaccc
tcatcgactgcgcacctgttaaaactcatatccggttcggactttgtttggcggcccact
gggaagactatcaatttgaatgctggaaattgggggtctctgagtcctgctgagcagagc
tttcaaattggcaccactcagggcctcatcttttcaatctcagtcgtcaacaatgaatcc
cattcttgtgaccacactcttttcccagagagcgtggcaagatacgtgcacactaaatct
taccttcttggtctcctgagagggctgattggaggaagcacctacatgagcatctaccat
agagacatatatgatcccaagcgaccaatcaaaattattcatggagcattggaatacctg
ttgacaaggctgctggattctccacattttatcccatctctctcaacatgggatctaaga
tggttaacccagggaattcctcaccgaattccaccctcatatccttcctcgaaaaaagac
ttaggtgcgacattgctggccttctttcatcatcacttggggaaggagactttaaagggt
agattgtgcagaacatggagtaaccgattgtggatcttttctgattttagaacaaccaag
tggatagggttgctgttatgtgccaattatacatatagtctgtattatgctgctgtgttg
tcgaccccccagataaataaactaagagaagttaaggacctcatttattacttccttagt
tcaggtaaccactcagactcagcgataagtttgacccctcattcgcagattaggttgaag
aagatcgttgctcaagcatacgggtgtccatatgaaattcggtttgctgttaagggctta
gttcagcaagttcccagacttgcccctcctctgtcccccgatgtatctgaatggtctgat
gagtatgtgcctaaatgctcaagaattatcgttacatgttctaatttgagacccaactac
aaggagcatgtggttaaacaaggttatatcaatgatcctcttatctcggggttgagactt
gctcagctcgccactggtgcacactataagatcagaggcattctaagatatctccaacaa
tttgacgatgtgctatgcggaggtgatggttccggaggtatgagtgcagcaattctaagg
ttctctcctaattccaagttaatcttcaacagtcttatgcaacccacaggagaatctttc
atgggagtgacaccagccgggccagctgcgattactgccatgccctcatctatccggtca
agatgtgtaaatctggagtcatgttggggggacccttctgatctaacctctcctttaaca
tggcggaacttcctgtatttacgtaacactcatcatcttaagataaacttagtggtctta
gacatggaggtgacaactttgaaccatttttatcaaattctcactcaattgaggcaacac
ttgcatgagttggtggagtccgacggacaagtggtcgtgaaatgctacgcctcacatcta
tctaacgatgagtatatagattctttgtcggggctgtgtcggctgtttcagcacatagaa
tcatacacgtcaatgatgtccagtagctttacatctgaattttatttagtgtgcaagaac
ttgataacagatgaacatcaaggacttttcattgatgcggagtctgtccattcaatttgc
atctcaagtcccagcaatagatcagtcagagatgagttccttagggcacttaagctcaag
aaggcaaacctgctcaaaggggtaccccctcacctgatccccaaagtggaagacgagctg
ttcgcagtcttaacgcatattggtgtggagactggaacgagcagactcataactcggaga
atcgagtctgaagtaagttctgcaaacataatcacttatatactggtaattctcataatc
ggctccaatagcattattaatacaacagaggaacatatgtcgcctagaaactatccgtca
tttgcctctctccaataccattatgctttattcgtcgggtgttggatgagcatcagctgg
atagttgaagacttgactctatatcaaacactgcactggtggattcagaataaggtttat
tatggtttcgttcagcgactcagacagaatgggcttaacttgatttggaaatggaatgca
ggagctgtgggtaagaaactttacaaaccatctagattagcccttagtagtcaactgatt
cgattattcacacgactcagcaagcacgtcgatacagggtttgatcttaataaaactgta
gtccgggcaacagggtat
DBGET
integrated database retrieval system
