Vibrio gazogenes: BSQ33_00280
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Entry
BSQ33_00280 CDS
T04933
Name
(GenBank) ATP-dependent helicase
KO
K19789
DNA repair protein RadD
Organism
vga
Vibrio gazogenes
Brite
KEGG Orthology (KO) [BR:
vga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vga03400
]
BSQ33_00280
DNA repair and recombination proteins [BR:
vga03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
BSQ33_00280
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_22
DZR
AAA
zinc_ribbon_2
ERCC3_RAD25_C
zf-tcix
SLFN-g3_helicase
zf-ribbon_3
AAA_16
AAA_30
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
ASA54312
UniProt:
A0A1Z2SAW1
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All DBs
Position
1:complement(58273..60018)
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AA seq
581 aa
AA seq
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MYTLRPYQSDAVKAVIHYFRHHHTPAVIVLPTGAGKSLVIAELARLAKGRVLVLAHVKEL
VEQNHEKYEGYGLNGAIFSAGLGRKETDQQVVFASVQSVARHLSAFSHQFSLLVIDECHR
VPDNQDSSYQKVISHLQANNPGIKILGLTATPYRLGMGWIYQYHTRGQVRSEQPRFFRDC
IFELPIHYLLDEAFLTPARLIDAPVLSYDFSQVKPMATGVYKTSELDKVISQAKRATPQI
IAQVIQQAQDRHGVMIFAATVHHAREIYALLPESETAIITGETPTQERDHLIRQFKQRQL
KYMVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIIGRGLRLAPGKQDCLILDYAGNQY
DLEQPEIGEPKPDSQSEIVTVPCPACGFNNNFWGKLDAGGFLIEHYGRRCQGYFTDEDTQ
ERHHCGYRFRAKYCHECGADNDIAARFCHECQTLLVDPDKKLKEALNLKDALVFECLNME
LNLHKDNHGKNQLKITYHGENQAQVHEFWPLTTQKQKRLFHQRFVRPHLADKHRPFHESS
PSRVIAHQHRFRLPQFVIARKSGRFWKLRDKIFADELSQKH
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgtatacacttcgtccttatcaaagtgatgctgtgaaagcagtcatccattattttcgt
catcaccatactccggcagtcattgttttaccgacaggtgcgggtaaaagccttgtcatt
gcagagctggccagactggcaaaaggacgggttcttgtactggctcatgtgaaagagttg
gttgaacaaaatcatgagaaatatgaagggtacggcctgaacggtgccattttttcggcc
ggtcttggcagaaaagagaccgatcaacaagtggtctttgcatcggttcagtctgttgcg
cgccacttgtcggcatttagtcatcagttttcattactcgtcattgatgaatgccatcgg
gtaccggacaatcaagacagcagctaccagaaagtcatttcgcaccttcaggccaataat
cccggcatcaaaattcttggcttaacagcaacgccctatcggctcgggatggggtggatt
tatcaataccatacccgcggtcaggttcgcagcgaacaaccccgtttcttccgggattgt
attttcgagctgccgattcattatctgttagatgaagcgtttttgacgccagccagattg
attgatgcgccggtactcagttacgacttttctcaggttaaaccaatggcaaccggtgtt
tataaaacctctgagctggacaaagtcatttcgcaggcaaaacgtgccacgccacagatc
attgctcaggtcatccaacaagctcaagaccgacatggcgtgatgatctttgccgcaacc
gttcatcatgcccgggaaatttatgccctgctccccgaatcagaaacagcaattatcacc
ggagaaacaccaacccaagagcgagatcacctgattcgacaatttaaacagcgtcagctg
aaatatatggtcaacgtctctgtattaaccactggttttgatgcccctcatgtggatctc
atcgcgattctgcgcccgaccgagtccgtcagtctctatcagcaaattatcggccggggg
ttacgccttgctcccggtaaacaagattgcctgatcctcgattatgccggtaatcaatac
gatctcgaacaacctgaaattggcgaacccaaacccgacagccagagtgagattgtcacc
gtcccttgcccggcatgtggctttaacaataatttttggggcaaattagatgccggcgga
tttttgattgaacattacggacgacgttgtcagggctactttaccgatgaagacacgcaa
gaacggcatcattgtggctatcgtttccgggcgaaatattgtcatgagtgtggtgccgac
aatgatattgccgctcgcttctgtcatgagtgccagaccctactggtcgatccggataag
aaactgaaagaagcactcaatctcaaagatgcgttagtgtttgaatgtctgaatatggag
ctcaatctacataaagataatcacggcaagaaccagctgaaaatcacttaccacggagag
aatcaggctcaggtccatgaattctggcctttgacaacccaaaaacagaaacgactgttt
catcaacgcttcgtcaggccacatctggcagataaacaccggccatttcacgaatcatca
ccaagccgagtcatcgcccatcaacatcggtttcggctgccacaatttgtgattgcgcgt
aaatcgggccgtttctggaagctcagagataagatatttgctgatgaattaagccaaaaa
cattag
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