KEGG   Vibrio gazogenes: BSQ33_00280
Entry
BSQ33_00280       CDS       T04933                                 
Name
(GenBank) ATP-dependent helicase
  KO
K19789  DNA repair protein RadD
Organism
vga  Vibrio gazogenes
Brite
KEGG Orthology (KO) [BR:vga00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vga03400]
    BSQ33_00280
DNA repair and recombination proteins [BR:vga03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factor
     BSQ33_00280
SSDB
Motif
Pfam: ResIII Helicase_C DEAD SWI2_SNF2 AAA_22 DZR AAA zinc_ribbon_2 ERCC3_RAD25_C zf-tcix SLFN-g3_helicase zf-ribbon_3 AAA_16 AAA_30 SNF2-rel_dom
Other DBs
NCBI-ProteinID: ASA54312
UniProt: A0A1Z2SAW1
LinkDB
Position
1:complement(58273..60018)
AA seq 581 aa
MYTLRPYQSDAVKAVIHYFRHHHTPAVIVLPTGAGKSLVIAELARLAKGRVLVLAHVKEL
VEQNHEKYEGYGLNGAIFSAGLGRKETDQQVVFASVQSVARHLSAFSHQFSLLVIDECHR
VPDNQDSSYQKVISHLQANNPGIKILGLTATPYRLGMGWIYQYHTRGQVRSEQPRFFRDC
IFELPIHYLLDEAFLTPARLIDAPVLSYDFSQVKPMATGVYKTSELDKVISQAKRATPQI
IAQVIQQAQDRHGVMIFAATVHHAREIYALLPESETAIITGETPTQERDHLIRQFKQRQL
KYMVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIIGRGLRLAPGKQDCLILDYAGNQY
DLEQPEIGEPKPDSQSEIVTVPCPACGFNNNFWGKLDAGGFLIEHYGRRCQGYFTDEDTQ
ERHHCGYRFRAKYCHECGADNDIAARFCHECQTLLVDPDKKLKEALNLKDALVFECLNME
LNLHKDNHGKNQLKITYHGENQAQVHEFWPLTTQKQKRLFHQRFVRPHLADKHRPFHESS
PSRVIAHQHRFRLPQFVIARKSGRFWKLRDKIFADELSQKH
NT seq 1746 nt   +upstreamnt  +downstreamnt
atgtatacacttcgtccttatcaaagtgatgctgtgaaagcagtcatccattattttcgt
catcaccatactccggcagtcattgttttaccgacaggtgcgggtaaaagccttgtcatt
gcagagctggccagactggcaaaaggacgggttcttgtactggctcatgtgaaagagttg
gttgaacaaaatcatgagaaatatgaagggtacggcctgaacggtgccattttttcggcc
ggtcttggcagaaaagagaccgatcaacaagtggtctttgcatcggttcagtctgttgcg
cgccacttgtcggcatttagtcatcagttttcattactcgtcattgatgaatgccatcgg
gtaccggacaatcaagacagcagctaccagaaagtcatttcgcaccttcaggccaataat
cccggcatcaaaattcttggcttaacagcaacgccctatcggctcgggatggggtggatt
tatcaataccatacccgcggtcaggttcgcagcgaacaaccccgtttcttccgggattgt
attttcgagctgccgattcattatctgttagatgaagcgtttttgacgccagccagattg
attgatgcgccggtactcagttacgacttttctcaggttaaaccaatggcaaccggtgtt
tataaaacctctgagctggacaaagtcatttcgcaggcaaaacgtgccacgccacagatc
attgctcaggtcatccaacaagctcaagaccgacatggcgtgatgatctttgccgcaacc
gttcatcatgcccgggaaatttatgccctgctccccgaatcagaaacagcaattatcacc
ggagaaacaccaacccaagagcgagatcacctgattcgacaatttaaacagcgtcagctg
aaatatatggtcaacgtctctgtattaaccactggttttgatgcccctcatgtggatctc
atcgcgattctgcgcccgaccgagtccgtcagtctctatcagcaaattatcggccggggg
ttacgccttgctcccggtaaacaagattgcctgatcctcgattatgccggtaatcaatac
gatctcgaacaacctgaaattggcgaacccaaacccgacagccagagtgagattgtcacc
gtcccttgcccggcatgtggctttaacaataatttttggggcaaattagatgccggcgga
tttttgattgaacattacggacgacgttgtcagggctactttaccgatgaagacacgcaa
gaacggcatcattgtggctatcgtttccgggcgaaatattgtcatgagtgtggtgccgac
aatgatattgccgctcgcttctgtcatgagtgccagaccctactggtcgatccggataag
aaactgaaagaagcactcaatctcaaagatgcgttagtgtttgaatgtctgaatatggag
ctcaatctacataaagataatcacggcaagaaccagctgaaaatcacttaccacggagag
aatcaggctcaggtccatgaattctggcctttgacaacccaaaaacagaaacgactgttt
catcaacgcttcgtcaggccacatctggcagataaacaccggccatttcacgaatcatca
ccaagccgagtcatcgcccatcaacatcggtttcggctgccacaatttgtgattgcgcgt
aaatcgggccgtttctggaagctcagagataagatatttgctgatgaattaagccaaaaa
cattag

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