Vibrio gigantis: MID13_10695
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Entry
MID13_10695 CDS
T08202
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
vgi
Vibrio gigantis
Pathway
vgi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MID13_10695 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vgi03400
]
MID13_10695 (uvrB)
DNA repair and recombination proteins [BR:
vgi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MID13_10695 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MID13_10695 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
PhageP22-tail
Motif
Other DBs
NCBI-ProteinID:
ULN63396
LinkDB
All DBs
Position
1:complement(2415739..2417769)
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AA seq
676 aa
AA seq
DB search
MSKLFDLVSDYSPSGDQPTAITKLLDGLDSGLAHQTLLGVTGSGKTFTLANVISQSQRPA
ILLAPNKTLAAQLYGEMKSFFPNNAVEYFVSYYDYYQPEAYVPTTDTFIEKDASVNAHIE
QMRLSATKALLERKDAIIVASVSAIYGLGDPKSYLKMMLHLSRGEVMDQRDILRRLAELQ
YSRNDVAFERGQFRVRGEVIDIFPAESDQDAVRIEMFDDEVDCISIFDPLTGAVKQRDLP
RFTVYPKTHYVTPREKILEAIENIKDELRDRAQYLKDNNKLLEEQRISQRTQFDIEMMTE
LGFCSGIENYSRYLSGRAEGEAPPTLFDYLPDDGLLIIDESHVTVPQIGAMYKGDRSRKE
TLVEFGFRLPSALDNRPMKFEEFESIAPQTIFVSATPGNYEIEKSDGEIADQVVRPTGLL
DPIIEVRPVATQVDELLSEIRIRSAKEERVLVTTLTKRMAEDLTEYLSEHGVKVRYLHSD
IDTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTI
GRAARNLEGKAILYGDSITKSMRKAIDETDRRREKQQAYNKEQGITPQALKRNIKDIMEL
GDITKSKQQRQSKQVPLSKVAEPSESYAVLTPQQLDKEISKLEATMYQHAQNLEFELAAQ
KRDEIEQLRKQFITNS
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaactctttgacttggtatcggactacagcccgtccggtgaccagccgacagcg
ataaccaaattactagatggattggattctggtttggcacatcaaactctactaggcgta
acgggctcaggtaaaacctttacgcttgccaacgtcatttcccaatctcaaagaccagcg
atcttgttagcgcccaataagacattggccgcgcaattatatggagagatgaaatccttc
tttcctaacaatgccgttgagtatttcgtttcatactacgattactaccagccagaagct
tacgtaccgacaacagacacattcattgagaaagatgcgtctgtaaacgctcatattgaa
cagatgaggctttcggcaaccaaagccttactggaacgaaaagacgccattatcgttgca
tctgtttcggctatttatggtcttggtgatcctaagtcttacttgaagatgatgcttcat
ttgagtcgtggtgaagttatggatcagcgagatatcttacgtcgcttggctgaattgcaa
tattcaagaaacgatgttgcgtttgagcgtggtcagttccgtgttcgtggtgaagtaatt
gatatcttcccggctgaatctgaccaagatgcagtgagaattgaaatgttcgatgacgaa
gtggattgcatcagtatttttgatcctctaactggtgcggttaagcaaagagacttaccg
cgctttaccgtttatccgaaaacgcattacgtaacgccaagggagaaaattcttgaggcg
attgagaacattaaagatgaacttcgagaccgagctcaatacttaaaagacaacaacaag
cttttggaagagcagcgtatttctcagagaactcaatttgatattgagatgatgacagag
ctcggcttctgttctggtatcgaaaactattcacgatacttgagcggccgcgcggaaggg
gaagcacctccgacattatttgattacttacctgatgatggtctgttgattatcgatgag
tcacacgtgaccgtaccgcaaattggcgccatgtataaaggtgaccgttcgcgtaaggaa
actctggttgagtttggtttccgtttgccttcggcattggataaccgtccaatgaagttt
gaagaattcgagtctatagctccacaaacgatttttgtgtcggcaacgccgggtaattac
gagattgaaaaatcagatggcgagattgcggatcaagtagtgcgtcctactggcctgtta
gacccaattattgaagtaagacctgtcgcgactcaagttgatgaactgctgtctgaaatc
agaatccgttcagcgaaagaagagcgtgttttggtgactacgttgactaagagaatggcg
gaagacttaaccgaatacctaagcgagcacggtgttaaagtgcgttatttgcactcggat
attgataccgttgagcgtgtagaaatcattcgagatctgcgtttgggtgagttcgacgtg
ttagtgggcattaacttacttcgtgaaggtttggatatgcctgaagtttcgctggtggcg
attcttgatgcagacaaagagggtttcttacgttctgagcgctctctgatccaaaccatt
ggtcgtgctgcacgtaaccttgaaggtaaagcgatcttatacggtgactcgattactaag
tcgatgagaaaagcgattgatgaaaccgatcgtcgccgtgagaaacagcaggcttacaac
aaagagcaaggcattacgccgcaagcgcttaagcgtaatatcaaagacattatggagctg
ggtgatatcaccaagtcgaaacagcagcgtcaatctaagcaagttccgctgtctaaggtg
gcggagccttcagaaagttatgctgtacttacgccgcaacagcttgataaagagatcagt
aagctcgaagctacgatgtatcagcatgctcagaacttggaatttgaattggcagcacag
aagcgtgatgagattgagcagctgagaaagcagtttattaccaatagctaa
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