Variibacter gotjawalensis: GJW-30_1_00321
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Entry
GJW-30_1_00321 CDS
T05320
Symbol
xpsD
Name
(GenBank) type II secretion system protein D precursor
KO
K02280
pilus assembly protein CpaC
Organism
vgo
Variibacter gotjawalensis
Pathway
vgo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vgo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GJW-30_1_00321 (xpsD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vgo02044
]
GJW-30_1_00321 (xpsD)
02035 Bacterial motility proteins [BR:
vgo02035
]
GJW-30_1_00321 (xpsD)
Secretion system [BR:
vgo02044
]
Type II secretion system
Tight adherence (Tad) export apparatus
GJW-30_1_00321 (xpsD)
Bacterial motility proteins [BR:
vgo02035
]
Pilus system
Pilus assembly proteins
GJW-30_1_00321 (xpsD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Secretin
T2SS-T3SS_pil_N
BON
Motif
Other DBs
NCBI-ProteinID:
BAT57811
UniProt:
A0A0S3PPK5
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All DBs
Position
complement(356585..357991)
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AA seq
468 aa
AA seq
DB search
MRKLITLAMVAATAALAVPQIAGASDPAAEFGADTRYNADTRSIPLGIGKSVVIDLPRDA
KDVLVGDPQVANAVVRTARRAYLIGVKVGQTNVFFFDADGKQIAGFDVAVTRDIGTLRQT
LRAALPQANVRVQVVGDGVVLTGVVTNAIESQQAVDIAARAVGNVTGVVNNLTIKAPDQV
MLKVAVVEMQRDIAKQLGVNISGQFAYGKTNLSFNSSPGGAGDGTNQIGGGWTSGGNSVS
ARLRALESAGVIRTLAEPNLTAISGEAATFLAGGEIPYLTTSCAASTGGTSQICTPVTSF
KPFGVQLAFVPVVLSDGRISLKVGTSVSELSTEGAVSINGTSVPSLKTRRVETVVELPSG
GSMTLAGLLQEQTRNVITGIPAAGQIPILGALFRSREYNNRQTELVIIVTPFIVRPTAEK
NLSRPDDGFADASDPQAVFLGKVNRVYGPPGKKDPRRQYHGSYGFIMD
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaactcatcacgctggcaatggtcgcggcaaccgcggcgctggccgtgccacag
atcgcgggcgcaagtgatcccgctgcagagttcggagctgacacgcgttacaacgccgac
acgcgctccattccgttgggtatcggcaaatcggtcgtgatcgacttgccgcgcgatgcg
aaggatgtgctggtcggtgatccgcaagttgcaaatgcagtcgttcgcacagcacgtcgc
gcctatctcatcggcgtcaaggttggccagaccaatgtctttttcttcgatgccgacggc
aagcaaatcgctggatttgatgtcgcagtcacgcgggacattggcacgctgcgccaaacg
cttcgcgccgcgcttcctcaagctaacgtccgtgttcaggtggtcggcgatggcgttgtg
ctcaccggggtggtgacgaatgctatcgaatcacagcaggccgtcgatatcgcggcgcgc
gcagtgggtaacgttacgggtgtggtgaacaacctcacgatcaaagcacctgatcaggtc
atgttgaaggttgcggttgtcgaaatgcagcgcgatatcgccaagcagcttggcgtgaac
atctctggtcaatttgcatacggcaaaacaaatctcagcttcaacagttcgccgggcggc
gcgggcgacgggactaatcaaatcggtggcggttggaccagcggcggcaacagtgtttcg
gcacgccttcgtgctcttgagagcgccggtgttatccgcactctcgctgagccgaatctc
acggcaatctcaggtgaagctgcgacgttcttggccggcggcgagattccttacctgacc
acgtcttgcgccgcctcaaccggtggcacgtcgcaaatttgtacccccgtcacaagcttc
aagccgttcggtgtgcaactggcctttgtccctgtcgttttgtcggatggtcgcatcagt
ctgaaagtcggcacgtcggtttcagagctctccacggaaggcgcagtctccatcaatggc
acctcggttccctcgctgaagacgcggcgtgttgaaactgtcgtcgagctgccgtcgggt
ggttcgatgacgcttgctggtcttcttcaggagcagacgcgcaacgtcatcacgggcatt
ccggcagctggccaaatacccatcttgggcgcgttgtttcgcagccgcgaatacaacaat
cgtcaaactgagctcgtgatcatcgtgacgccttttatcgttcggccgacggcagagaag
aacctctcgcgtcctgacgatggtttcgcggacgcttctgatccgcaggcagtatttctc
ggcaaggtcaaccgtgtgtacggcccgccaggcaaaaaagatccacgacgccagtaccat
ggctcctacggcttcattatggactga
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