Vallitalea guaymasensis: HYG85_05480
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Entry
HYG85_05480 CDS
T07172
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
vgu
Vallitalea guaymasensis
Pathway
vgu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vgu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HYG85_05480 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vgu03021
]
HYG85_05480 (rho)
03019 Messenger RNA biogenesis [BR:
vgu03019
]
HYG85_05480 (rho)
Transcription machinery [BR:
vgu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
HYG85_05480 (rho)
Messenger RNA biogenesis [BR:
vgu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HYG85_05480 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
NACHT
AAA_14
AAA_22
SAP
AAA_25
Spore_III_AA
AAA_18
Motif
Other DBs
NCBI-ProteinID:
QUH28399
UniProt:
A0A8J8M8N9
LinkDB
All DBs
Position
complement(1203987..1205624)
Genome browser
AA seq
545 aa
AA seq
DB search
MSTDFKKFTLAELRKKAKEIGIRSVTTFKKAELVQILTEVEAKQQGKEEEKLEQNMEQEK
PQKTEPEQKEKSQPKTKKKLVKKPQPKLEKVEQKEEPKIEQKAEKTINKEKIVPKKTDYK
KQQYKIEDRKEVQKVINKESNENNKEIKKEVHRDKPAKTVPSDFQDLNSGEIAYGVLEVL
PDGFGFIRCANYLPGEDDVYVSPSQIRRFNLKTGDLIIGNIRVPKENEKFRALLYVQSVN
GDSPANAAKRPNFEDLTPIFPDERVRLETISSEYSTRLIDFVAPIGKGQRGMIVAPPKAG
KTTLLKKIANAITKNHPDSHLIVLLIDERPEEVTDIRRSINGDNVEVIYSTFDELPEHHK
RVSEMVLARAKRMVEQKKDLYILLDSITRLARAYNLTIPPSGRTLSGGLDPAALHMPKKF
FGAARNIEEGGSLTILATALVETGSKMDEVVFEEFKGTGNMELVLDRKLSEKRIFPAIDI
AKSGTRRDDLLYTKEEMEAIYRLRKASSNMRSDEVTESILKVFVKSKNNTDFFNTINNNL
LDKYR
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgagtacagatttcaaaaaattcactttagctgagcttcgcaagaaagcaaaagaaatt
ggcattagaagtgttacaacattcaagaaagcagagcttgtgcaaattcttacggaagtt
gaagctaaacaacaagggaaagaagaagaaaaactagaacaaaatatggaacaagaaaag
ccacaaaaaacagaaccagaacaaaaagaaaaatcacaacctaaaacaaaaaagaaacta
gtaaagaaaccgcagccaaaactcgaaaaagtggaacaaaaagaagagccgaagatagaa
caaaaagcagaaaaaaccattaataaagagaaaattgttcctaagaaaacagattataaa
aaacagcaatataaaatagaagatagaaaagaagttcaaaaagttataaataaagaatct
aatgaaaataacaaggaaatcaaaaaagaagtacatagagataaaccagctaaaactgta
ccttcagatttccaagatttaaatagcggagaaatagcttacggagtattggaagtatta
ccagatggattcggttttattagatgtgctaattatctaccaggtgaagatgatgtttat
gtgtcaccatcacaaattagaagatttaatttaaagactggagatttaataattggtaat
ataagagtaccaaaagaaaatgagaaatttagagcattactatatgtccagtctgtaaat
ggcgattcacctgccaatgcggctaaaagacctaattttgaagacttaacacctattttc
cctgatgaaagggttcgtcttgaaacaatctcttcagaatattcaaccagactaattgat
tttgttgcgcctattggtaaagggcaaaggggtatgattgtggcacctccaaaagcaggt
aagacaacattgcttaaaaaaattgccaatgccataacaaaaaatcatcctgattctcat
cttatagttttattaattgatgaaagacccgaagaagtaacagatataagacgttctatc
aatggtgacaatgtagaggttatatattctacttttgatgaactgcctgaacatcataaa
agagtttctgaaatggtgttggcaagagccaagagaatggttgagcagaagaaagatcta
tatatattgcttgacagtataacaagattggcaagagcttataacttaactattccacct
agtggaagaactttatctggaggtcttgatccagcagcgcttcatatgcctaaaaaattc
tttggtgcagctagaaatatcgaagaaggaggaagtcttacaatacttgctacagcactt
gttgaaacaggaagtaagatggacgaagtagtatttgaagagtttaaaggaacaggtaat
atggagttggttcttgatagaaaactatctgaaaaaagaatattcccagctattgatatt
gccaaatctggtacaagaagagatgatctactatatacaaaagaagagatggaagctatt
tatagattaaggaaagcaagcagtaatatgcgttcagacgaggttactgagagtatacta
aaagtttttgttaaatctaagaataacacggatttctttaatacaatcaacaataatcta
ctagataaatatagataa
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