Vibrio campbellii ATCC BAA-1116: VIBHAR_01878
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Entry
VIBHAR_01878 CDS
T00589
Name
(GenBank) hypothetical protein
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
vha
Vibrio campbellii ATCC BAA-1116
Pathway
vha03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VIBHAR_01878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vha03400
]
VIBHAR_01878
Enzymes [BR:
vha01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
VIBHAR_01878
DNA repair and recombination proteins [BR:
vha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VIBHAR_01878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Seryl_tRNA_N
Motif
Other DBs
NCBI-ProteinID:
ABU70845
UniProt:
A7MWY5
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All DBs
Position
I:1891785..1892375
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AA seq
196 aa
AA seq
DB search
MEQNTCAWAMNHPLEREYHDAEWGVPVYDDNVLFEFITLEGAQAGLSWITILKKREGYRQ
AFENYDLDKLIQRDEVRTEFIVENFDVVKHRGKINSVFSNAKAAKQLIEEYGSLSNALWQ
FVDGKPIVNHWTDMSQVPVSTEQSKAMSKFLKKKGFKFVGETICYAFMQAVGMVDDHMVS
CPKKTTDRFCLLNSEC
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaaatacgtgtgcatgggcgatgaaccatccacttgagcgtgaatatcatgat
gcagagtggggtgtacccgtttatgacgataacgtgttgtttgagttcatcacgttagaa
ggcgcgcaagccggtttaagttggattacgattttgaaaaagcgagaaggctatcgccaa
gcattcgaaaactatgacttagataagctcattcaacgtgatgaagtacgtactgagttc
atcgtagaaaacttcgacgtggttaagcaccgtggcaaaattaactcggtatttagcaac
gctaaagcggcaaagcaattaatcgaagaatacggcagcctatctaatgctctatggcag
tttgttgatggcaaacctatagtgaatcattggacagacatgagccaagtgccagtctcc
acggaacagtccaaagcaatgagtaagttccttaaaaagaaaggctttaaatttgtgggt
gagacgatctgctatgccttcatgcaagcagtcggtatggtcgatgaccatatggtaagt
tgcccgaaaaaaacaactgatcggttttgcttattgaatagcgaatgttga
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