KEGG   Vibrio harveyi: AL538_21530
Entry
AL538_21530       CDS       T04380                                 
Name
(GenBank) restriction endonuclease subunit R
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
vhr  Vibrio harveyi
Brite
KEGG Orthology (KO) [BR:vhr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:vhr02048]
    AL538_21530
Enzymes [BR:vhr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     AL538_21530
Prokaryotic defense system [BR:vhr02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   AL538_21530
SSDB
Motif
Pfam: ResIII SWI2_SNF2 EcoEI_R_C Helicase_C DEAD HSDR_N HSDR_N_2 DUF4145 Clusterin CAF1
Other DBs
NCBI-ProteinID: AMG00275
UniProt: A0A454BDK4
LinkDB
Position
2:940557..943916
AA seq 1119 aa
MSTSLNFELIREHNEKLANLGHLAEQILHLDPGSAITRLRGFAEEVTKEIYSIDGLPRLP
QATFMELLKNDAFVEVTESRLRDQLHFLRIEGNETAHGGDGNVRKAYAALGTAHSLSQYM
AINYYGFQVSDLQELKYPESALNSNLSQKQLEKVIEENEKQQEALLKELERERQAREAAE
SKAERTQEQLKQAKARSQQTANSLEWDEDKTRQLLIDTQLAQAGWDINDKESVGIEVEVK
HQPTATGIGYADYVLWNDDGTPLAVVEAKRAREHLQKGREQARYYAEGLAKQFDCAVPIV
FYTNGYEICLWDTKQYNTYRQIFGFYSKESLQFLQYQHQYKEPNLEVLNPNVDIAGRPYQ
IEAIKAVTSQLQNQRRKALIVQATGTGKTRVSIALVELLLRSRWVKRVLFLCDRKELRRQ
ADGAFKDYLPTEPRCVIGEKNQIDTSARVFVSTYPGMMNRFSQLDVGFFDLIIADESHRS
IYNRYRDIFDYFDAIQVGLTATPVKFIARNTYDLFGCENGDPTFNFDLAEAISHEPRYLN
PFRVKEFTTEFLRDGIHYSKLTPEQQAQLEEDLGEEEAQKTTIQGKDIGKKIFSVETDSA
ILENLIENGIKDATNSLVGKTIIFAQNQAHAEQLEKLFCEELYPQYGSKVCKVIHNKVDR
PEARIDEFKNPNNDFRIAISVDMMDTGIDVPEVVNLVFARPVKSWVKFWQMIGRGTRLCP
DLFGPGQDKEEFLIFDHYGNFAYFEEEYVEADTGQSRSLLQTVFEARLELADEAMKKADV
ATFELACAQMKADICDLPDGAIAVRRELRTVKQLQETDMILEMNGSTRHILETKMAPLMG
SRTLKDKDASMLDRLMSQVEKANLTGSSDIENLKADLISRLQNLAVNITDVRKQGDEIAK
VQTQQYWDSLSIEQLETTRTNLRGIMKYKKRETSVYDATPTTRAGDGDVIENDRVVVIGD
ESEAMVYRKRIKDILETMLANNPVLQKIHQNQPVTEEELMSLTSTILTQHPGVDVNALNA
FYGNTPEQLSETLIQLVGLDAELVNERFTEFMQTNQLSYIQVQFLNQLKGFICRHGRIKM
ANLYEGQFDKLTNGEGLDIFNDATADQLEALIEPFLLPH
NT seq 3360 nt   +upstreamnt  +downstreamnt
atgtcgacatctctgaactttgagctaattcgtgaacacaatgaaaaattggccaattta
ggtcatctagctgagcaaatactccaccttgatcctggaagtgcgataacgcgtcttcgc
ggttttgccgaagaggtgactaaagagatctactctattgatggtttaccacgtttaccg
caagcaacctttatggagttgttgaaaaatgacgcttttgttgaggtaaccgaatctcgc
ttacgagatcaactccactttttaagaattgaggggaacgagactgcccacggcggagat
ggcaacgtacgtaaagcatacgcggcacttggcactgcacactcgttatctcaatacatg
gcaatcaactactatggtttccaagtatctgatcttcaggagcttaagtatccagagtcg
gcgttaaactcaaacttatcgcaaaaacaattagaaaaagttattgaagagaacgagaag
caacaagaagccttgttgaaagagctagagcgtgagcgccaagctcgagaagctgcagaa
tcaaaagcagagcgtactcaagaacagctaaaacaagcgaaagctcgtagtcaacaaaca
gcaaatagcttggaatgggatgaagacaaaacccgccagttactaattgatactcaactt
gcacaagctggatgggacatcaatgacaaagaaagcgttggtatcgaagtagaagtgaaa
caccaacctacagccacgggtattggttatgcagattacgtactgtggaacgatgatggc
accccacttgcggttgtcgaagccaagcgtgcgcgtgagcatctacaaaagggccgtgag
caagcgcgttactatgcagagggtttagctaaacagttcgattgcgccgtgcctattgtg
ttttacaccaatggttatgaaatctgtctttgggacaccaagcagtacaatacctaccgc
cagattttcggattttactcgaaagaaagtctgcagttcttgcagtaccaacaccagtac
aaagagccaaacctagaagtactcaacccaaatgtggacatcgcgggtcgtccataccaa
atagaagcgattaaggccgtaaccagtcagttacagaatcaacgtcgaaaagccttgatt
gttcaggcaacaggtacggggaaaacgcgtgtatccattgcgctggtggagctattgctg
cgttcacgctgggtgaaacgagtcctatttttatgtgaccgaaaagagcttcgccgacaa
gccgatggcgcattcaaagattacctccctacagaaccacgttgcgtgattggagagaaa
aaccaaatcgacacctctgcacgtgtttttgtttccacgtatcctggcatgatgaaccga
ttctcacagttagatgttggcttcttcgacttaattattgccgatgaatcacatcgcagt
atctacaatcgctaccgtgacatctttgattattttgatgccattcaagtcggtcttacg
gccacgccagttaagttcattgcacgtaacacttatgacctgtttggttgtgaaaatggc
gacccgacattcaactttgacttagctgaagccatctcccatgagccacgttatttgaat
ccgtttcgagtgaaagagttcaccacggagttccttcgtgatgggattcactacagtaag
ttaacgccagagcaacaggcgcaactagaggaagacttaggcgaagaagaagcgcaaaag
actaccatccaaggcaaagatattggcaagaagattttcagtgtcgaaactgacagtgcg
atactcgaaaacctgattgaaaatgggataaaagatgcgaccaactcgctagtgggtaaa
accatcatttttgcccagaatcaagcgcatgccgagcagcttgagaaactattctgtgaa
gagttgtatccacaatatggtagcaaagtttgtaaggtcatccataacaaagtggatcgt
ccagaagcccgtatcgacgagtttaagaacccaaacaacgatttccgtattgctatttcc
gtcgacatgatggacaccggcattgatgtgccagaggtagtcaaccttgtgtttgctcgc
ccggttaagtcatgggtaaaattctggcagatgattggtcgtggtacgcgtctgtgtcca
gatttgtttggcccggggcaagacaaagaagagttcttgattttcgaccattatggcaac
tttgcctattttgaagaagaatacgtcgaagccgatacggggcaaagccgttcattgctg
caaacggtctttgaagcgcgtcttgagctggctgatgaagcgatgaaaaaagcggatgtg
gccacttttgagcttgcttgtgcccagatgaaagcagacatctgtgacttgcctgatggc
gccattgccgttcgtcgcgagcttcgcacggtcaaacagctacaagaaaccgacatgatc
cttgaaatgaacggttcgactcgacacatactcgaaaccaagatggcaccgttaatgggc
tcgcgcacattaaaagacaaagacgcctcaatgctcgacagattgatgtcgcaagttgaa
aaggctaacttaaccggcagtagcgatattgaaaacctcaaagctgatttgatttcacga
ttgcaaaacctagcggtcaacattactgatgttcgtaaacaaggtgatgagattgcaaaa
gttcaaacccaacaatactgggattcattgtctatagagcagcttgaaacgacgcgcaca
aacttgcgcggtatcatgaagtacaagaagagagaaacctccgtttatgatgccacgcca
acaacacgcgcgggtgacggtgatgtcattgaaaacgaccgcgtagtggtaataggtgat
gagagtgaggcgatggtgtatcgcaaacgcattaaagacattcttgaaactatgctcgcg
aacaacccagtgttacaaaagattcatcagaatcaacctgtgactgaagaagagttaatg
tcgctaacttcgaccattctcacccagcaccctggtgttgatgtgaatgcgttgaatgcc
ttctatggcaatacaccagagcaactgagcgaaacgcttattcagttagttgggctcgat
gccgagttagttaatgaacgatttaccgagtttatgcagactaaccagttgtcctacatt
caagtgcagttcttaaaccagctcaaagggtttatttgccgacacggacgcatcaaaatg
gcaaacctgtatgaagggcagtttgacaaactaacgaatggggaagggctggatatcttc
aatgatgccaccgcagatcagttagaagcgctgattgagcctttcttgctgcctcactaa

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