Vagococcus hydrophili: G7082_11440
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Entry
G7082_11440 CDS
T07081
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K19505
sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator
Organism
vhy
Vagococcus hydrophili
Brite
KEGG Orthology (KO) [BR:
vhy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vhy03000
]
G7082_11440
Transcription factors [BR:
vhy03000
]
Prokaryotic type
Helix-turn-helix
Other families
G7082_11440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PRD
AAA
AAA_5
AAA_22
Sigma54_activ_2
Mg_chelatase
AAA_2
EIIA-man
RuvB_N
HTH_5
HTH_IclR
HTH_24
AAA_14
MarR_2
AAA_16
TniB
NACHT
HTH_45
HTH_20
RNA_helicase
MarR
HTH_11
z-alpha
Dimerisation2-like_dom
AAA_7
HTH_23
TrmB
UPF0262
MCM
GerE
ABC_tran
DEP
Motif
Other DBs
NCBI-ProteinID:
QIL49055
UniProt:
A0A6G8AVU1
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All DBs
Position
2328237..2330762
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AA seq
841 aa
AA seq
DB search
MKKETHDLILKILENEKEGLTTTEIAKALDLSRSATSLYLNKLLEKREIDQKGSRPVLWQ
SIGLSQTEIKDVFQQYIGYDGSAREAIEKCKAAILYPPIGLPLLLCGPSGVGKSFLAKII
FDYLKEHRKEEAKTFITFNCADYANNPELLSSILFGHTKGAFTGAENDKKGLLLQANGGV
LFLDEVHRLSKENQEKLFQFMDSGKFRPVGEESKVVSSQVRLLFATTEEPKEVLLPTFYR
RISVVVNLPALHERSILERISLVNHLFMRESLRLNCDLKIESKIFKQLLDQQIPGNVGSL
INEIQMYCADALRKSTTPEVLEISEGKQTEFTMISYQAHQSSRKIDYMSQLNDAFTSLMN
SETAVIDLKEELLQFDTHFLEGNFHVENDVLGNQLMLQISQNNQQIINDPQLTCRSVKSI
IRFLQINQNSLSIKTLEELKRKVTKEYPRTALFAHYVTEKVSSEIKLFVEVMLSVLLIDK
ISEDIRYHALLVAHGDTTASSIRGVANKLCGEYIFDAINMPLTSSIRDVVAQVKIWLSER
DTSEGVIMLVDMGSLTHLYKSLKPQILGELLVINNLTTSYALEIGQQLVNGQMFYDVAKH
AEKTFQTNVQYFEGFSVEKNIIISSISGHDISKKLKAICEKNFNPDIKIITLNFNELRNI
LDRASNEQDYLKETSLILTTSYLDNQTDVPSVNLLDVLDEDAEKQLDITFKNLIHPNNVA
NILNEFIHFFSKEGLSEKLEFLNPDVIIKQVENTTEKCEKRFNLQLSAKMKFNFTMHLAL
MIERMMLGDTDYPVPGNLSELKLNNKFFYQNMKDILYILEQFYRIQISDWELFVLYEILN
A
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagaaacccatgacctaatattaaaaatactggaaaatgaaaaagaaggtctg
acaacaacagaaatagcaaaggcacttgatttaagtcgttcagctactagtttgtattta
aataaattactagaaaaaagagaaattgatcaaaaaggaagtcgccctgttttatggcaa
tccattggtttaagtcaaacagagattaaagatgtttttcaacaatacatcggctatgac
ggaagtgctcgtgaagcgatagaaaaatgtaaagcagcaattttgtatcctcccattggc
ttacctttgttattgtgtggtccaagtggtgtgggaaaaagttttttagcaaaaattatt
tttgattacttgaaggagcacagaaaagaagaagcgaagacttttattacatttaactgt
gcagattacgcgaataatccagagttattatcatcgattttatttggacacacaaaaggt
gcgtttacaggagccgaaaatgataaaaaaggcctattgcttcaagcaaatggcggcgtc
ttatttttagatgaagttcaccgattatcaaaagaaaatcaagaaaaactgttccaattt
atggatagtggtaaattcagaccggtgggtgaagaaagcaaagttgtctctagccaagtt
cgtctgttatttgcaacaacggaagaaccaaaagaagtcttattgcccactttttaccga
cggatttcagtggttgttaatctacctgcccttcatgaacggtctattttggagcgaata
tctttagttaatcatttatttatgagagaatcactgcgtttaaattgtgatttaaaaatt
gagagtaaaatttttaagcaattattagatcaacaaattccgggaaatgtaggaagtttg
attaatgaaattcaaatgtactgtgcagatgctttaagaaaaagtaccactccggaggtc
ttagaaataagtgaaggaaaacaaacggaatttacgatgatttcttatcaagcacatcaa
agtagtcgtaaaattgattacatgagtcaattaaatgatgcgtttacctcattaatgaat
agcgaaacagctgtcattgatttgaaggaggaactcttacaatttgatactcatttttta
gaaggcaattttcatgtggaaaatgatgtcttaggcaatcagttaatgcttcaaataagt
cagaacaatcaacaaataattaatgacccacagttaacttgtcgtagtgtcaaaagtatt
attcggtttcttcaaattaatcaaaattctttgtcgattaaaactcttgaggagctcaaa
agaaaagtcacgaaggaatatccccgaacagccttatttgctcattatgtgacagaaaaa
gtatcgtctgaaatcaagttatttgtggaagttatgttaagcgtgttgcttattgacaag
atatctgaggacattagatatcacgccttacttgttgctcacggagataccacagcctca
agcattcgaggagttgctaataagttgtgtggggaatatatttttgacgcaatcaatatg
cctttaacctcatcaattagagatgtggtggctcaggtgaaaatttggctttcggaaaga
gatacttcagagggcgttattatgttggtagatatgggatcgttaactcatttatacaaa
agtttgaaaccacaaatactaggtgagttacttgtaatcaataacttgaccacgtcgtac
gcccttgagattggacagcagttggttaacggtcaaatgttctatgatgtagctaaacac
gcagaaaaaacctttcaaaccaacgttcaatattttgaaggtttttcggttgaaaaaaat
attatcatctcaagtatctctggacatgatatatctaaaaaattaaaagcaatttgtgag
aagaactttaatcctgatataaaaattattacgctgaattttaatgaacttagaaacatt
ttagatcgggccagtaatgagcaggattatttgaaggaaacttctctcatcctaacaact
tcttatttagataatcaaacagatgttccaagtgtcaatttacttgatgttttagatgaa
gatgcagaaaaacaattggatataacctttaaaaatttgattcatccaaataatgtggca
aatattttaaatgagtttattcatttcttttcaaaagaaggtttgtctgaaaaattagag
tttttaaaccctgatgtgattattaagcaagttgaaaataccactgaaaaatgtgagaaa
cgctttaatttacaattaagcgcaaaaatgaaatttaattttaccatgcatttggcgtta
atgattgagcgaatgatgctaggtgacacagattatcctgtgccaggtaatttatcagag
cttaaactaaataataagttcttttatcaaaatatgaaggacatcctttatattttggaa
cagttttaccgaattcaaatatcagattgggaattatttgttttatatgaaatattaaat
gcttaa
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