Virgibacillus sp. 6R: BKP57_10525
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Entry
BKP57_10525 CDS
T04596
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
vig
Virgibacillus sp. 6R
Brite
KEGG Orthology (KO) [BR:
vig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vig03032
]
BKP57_10525
03400 DNA repair and recombination proteins [BR:
vig03400
]
BKP57_10525
Enzymes [BR:
vig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BKP57_10525
DNA replication proteins [BR:
vig03032
]
Prokaryotic type
DNA Topoisomerases
BKP57_10525
DNA repair and recombination proteins [BR:
vig03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BKP57_10525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Retrotran_gag_2
PHP
NTase_sub_bind
Motif
Other DBs
NCBI-ProteinID:
API92228
LinkDB
All DBs
Position
2381298..2383802
Genome browser
AA seq
834 aa
AA seq
DB search
MADQQRPKVQEINLGQEMRTSFLDYAMSVIVSRALPDVRDGLKPVHRRILYAMNDLGMHA
DKAYKKSARIVGEVIGKYHPHGDSAVYEAMVRMAQDFSYRNMLVDGHGNFGSVDGDSAAA
MRYTEARMSKISMELLRDINKDTIDYTDNYDGSEREPVVFPARFPNLLVNGASGIAVGMA
TNIPPHNLGETINAVLALSKDPDITIDELMEDYIHGPDFPTAGQILGRSGIRKAYETGKG
SITIRAKVTIDETANGKPRIIATELPYQVNKAKLIEKIAELVRDKRIDGITDLRDESDRE
GLRVVIELRRDANANVVLNNLYKHTALQTTFGINMLALVGGRPKVLNIKQCLEHYLEHQK
VIIKRRTAFELRKAEARAHILEGLRIALDHLDEVIKLIRNSKTADVARNGLMERFDLSEK
QAQAILDMRLQRLTGLEREKIEDEYKELKKLIEELKAILADEEKVLEIIREELTEIKERF
NDDRRSEIVIGGSDFFEDEDLIPEENIVITLTHQGYIKRLPSSTYRTQKRGGRGIQGMGT
NEDDFVEHLVSTSTHDTILFFTNKGKVYKAKGYEIPEFSRTAKGIPIINLLQVEKGEWVN
AVISVNDYRDDQFLFFTTKHGISKRTSLAQFANIRKGGLIAVGLRDEDELISVRLTDGTK
DIMIATKNGYLIRFPEKQVRPMGRNAAGVKGISLRKDDEVVSMEILQEDAKILHVTNKGF
GKQTPESEYRITNRGGKGIFTCNLTEKTGHVVAVKAVSGEEDLMLITVAGVLIRIPVESI
SVTGRNTMGVRLIRLHDEEEVATVARIDPDEDEEEQEITDHEEEASEEPESSNE
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcaacaacgtccaaaagtacaggaaattaatctcggacaagagatgcgtaca
tcgtttctggattatgcaatgagtgttattgtttctcgtgcattgcctgacgtccgtgat
ggattaaagcctgtacatcgaagaatattatatgcaatgaatgatttaggaatgcatgca
gataaagcgtataaaaaatcagcacgtattgtcggagaggtaattggtaaatatcatcca
catggtgactcggctgtttacgaagcaatggtgcggatggctcaggatttcagctatcgg
aatatgctagtagatggacacgggaattttggttcagttgatggtgattcagcagcagcc
atgcgttatacagaagcaagaatgtcaaaaatatccatggaattactacgagatattaat
aaagatacgattgattataccgataactatgacggctcggaacgagaaccagttgttttc
cccgcgcgttttccaaatttattagtgaacggtgcttctggtattgcagtaggtatggca
acgaatatcccgccacataatttaggggaaacgataaatgctgtactcgcattaagtaaa
gatcctgatataaccattgatgaactgatggaagactatattcatggtcctgactttcca
acagcgggacagattcttggccgcagtggtattcgcaaagcgtatgaaacaggtaaaggc
tcgatcaccattcgggcaaaagttacgattgatgaaacagcaaatggtaaaccaaggatt
attgctacagaattaccatatcaagtaaacaaagcgaaattaatcgaaaaaattgccgag
cttgttcgagataaacggattgatggaattacggatttgcgtgatgaatcagaccgtgaa
ggattaagagtagttatcgagcttagacgtgatgccaatgcgaatgttgtattaaataat
ttatacaagcatacagcattgcaaacaacgtttggtattaatatgttggcacttgtaggt
ggacgtccaaaagtgctaaacataaaacaatgtcttgaacattatttagaacatcaaaaa
gtgattattaaacgcagaacagcatttgaattacgtaaagcagaagctcgtgctcatatt
ttggaagggttgcgtattgcgttagatcatttagacgaagttataaaacttattcgtaac
tccaagacagcagatgttgctcgtaacggattaatggagcgttttgatttatctgagaag
caggcgcaagctattttggatatgcgtttgcaacgtttaactggcttggaacgggaaaaa
attgaagatgaatataaggaattaaagaaactaattgaagaattaaaagcgattcttgca
gatgaagaaaaagtattagaaatcatccgtgaggagcttaccgaaattaaagaacgtttt
aatgatgatcgacgtagcgaaatagtaattggcggcagtgatttctttgaggatgaggat
ttaatcccagaagaaaatattgtcattacgttaacccatcaaggttatattaaacgtctt
ccttcctccacgtatcgtacgcaaaaacgcggtggtcgcgggatacaaggaatgggaacg
aacgaggatgattttgttgaacatctcgtttccacttctacacatgatacgattttattc
tttaccaataaaggaaaagtatacaaagcgaaaggttatgagattcctgaatttagtcga
acggcgaaagggataccaattattaatcttttgcaagttgaaaaaggtgaatgggtcaat
gcggtcatttctgttaatgactatcgggatgatcagtttctattctttacaacgaagcat
ggtatttcgaaacgtacgtccttagcgcaatttgcgaacatccgcaaaggcgggctaata
gcagtaggtcttcgtgacgaagatgagcttatatcggttcgcttaacggatggaacaaag
gatattatgattgcaacgaaaaacggttaccttattcgttttcctgagaagcaggtccgt
cctatgggaagaaatgcagccggggtaaaaggaatttcgttacgaaaagatgacgaagtt
gtttctatggaaattctacaagaggatgcaaaaattctccatgtaactaataaaggtttt
ggtaagcagacaccagaatcagaatatcgaattacgaatcgtggcggaaaaggaattttt
acttgtaatttaaccgaaaaaacgggacatgtcgtagcagtaaaggcagtgtctggagaa
gaagatttgatgttaattacggttgctggtgtgctcattcgtattcctgtagaaagtata
tcggtaacaggtagaaatacgatgggggttcggctaattcgtttgcatgatgaggaggaa
gtagcaacggttgctcgaattgatccagatgaggacgaagaggaacaggaaattacagat
catgaagaagaagcatcagaagagccagaaagtagtaatgaataa
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