Viridibacillus sp. JNUCC-6: JNUCC6_08590
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Entry
JNUCC6_08590 CDS
T06874
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
vij
Viridibacillus sp. JNUCC-6
Pathway
vij03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vij00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JNUCC6_08590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vij03400
]
JNUCC6_08590
Enzymes [BR:
vij01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
JNUCC6_08590
DNA repair and recombination proteins [BR:
vij03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JNUCC6_08590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_4
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
AAA_22
CPT
DEAD
nSTAND3
AAA
AAA_28
HHH_5
AAA_16
TsaE
AAA_5
AAA_12
NACHT
AAA_25
UvrD-helicase
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
QOV12791
UniProt:
A0A7M2QYP1
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All DBs
Position
complement(1719284..1721755)
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AA seq
823 aa
AA seq
DB search
MTENVSLFQEEQLFIVGRPVVSIFHNPQNLFSIIKLKIQETNTTYQEKEIIVTGFFPSVV
QETLYRFTGQLKQHPKYGIQFQANTFVKEIPGTEQGVVHYLSSDLFPGIGHKTAETIVKK
LGKDAIKIIINNPDALDEIPRLTEDKKETLRSVLEQNLGLDRIMIQLNDWGFGPQLAVRI
YQMYENETIQLLTENPYRLIEEVEGVGFQRADELGAKLHITGDHPDRIKAAVLHLLNAGA
LSEGHVYMEAKDILPQAKSLLEMSQAYEIPFEAISKACIELREDSKICGEETRLYMPSLY
FSEIGIASKITELVQKNAEQSAFPTSEIRKFIGDAEERFGVSYAETQVDAIEKAINSAVM
ILTGGPGTGKTTVVRGIVDVYAELHGLTLNPKDYIEKDEPFPIVLVAPTGRAAKRLSEST
ELPAMTIHRLLGFTGQEKEEETEKEVGGRLIIVDEMSMVDTWLAHQLLKSLNDDCQVIFV
GDQDQLPPVGPGQVLKDLLASKAIPTVELTDVYRQADGSSIIELAHQMKKGEMPQNMLAK
TSDRSFIQAGSDQVADVIKQVVSSAVKKGFSIHDVQILAPMYRGPAGIDAINKMIQELVN
PKKTEKSKEITFGDVTYRIGDKILQLVNQPNSNVFNGDMGEVISIIKANETIEKQDLLVA
SYDGIEVTYQRGDLNQITLAYCCSIHKSQGSEFQTVIMPVVRGYSKMLRKNLLYTGITRA
KNFLILCGEIDVFKYGMLRTDDLQRNTTLAQRLQIEEVLEAVKDSVEPELAQVSETTNST
NVEPQEEQLSLESQSLNTDNYLDIHPLIGMKGISPYDFLEEEI
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
ttgactgaaaatgtatcattgtttcaagaagaacagctatttatagtcggtcggcctgtc
gtctctatcttccataatcctcagaatttattttccatcattaagttaaaaatccaagaa
acgaatacgacatatcaagaaaaagaaattatcgtgacaggcttttttccatctgtcgtt
caagaaacgttgtatcgttttactggacaattgaaacagcatcctaaatacggcatacaa
tttcaagctaatacttttgttaaagagattcctggtactgaacaaggtgtcgtacattac
ttgtcgagtgatttattcccagggataggtcataaaacggctgagacaatcgttaaaaag
ctagggaaagacgccattaaaattattattaataatccggatgcacttgatgaaattcca
aggcttacagaagataaaaaagagacattacgctccgtactagagcaaaatctaggattg
gatcgtattatgatccaattaaatgattggggctttggcccacaactagcagtgcgtata
taccaaatgtatgaaaatgaaacaattcaacttttaacagagaatccttacagacttatt
gaagaagttgaaggtgtaggttttcaacgtgccgatgaattaggagctaaactacatatt
acaggggaccatccagatcgtattaaagctgctgtgttacacctattaaatgcaggtgct
ctgtcagaggggcatgtatatatggaagcgaaggatattctgccacaagcgaaaagccta
cttgaaatgagtcaggcatatgaaattccttttgaggcgatttcaaaagcctgtatcgag
cttcgcgaggacagtaaaatttgtggtgaagaaacacgcctctatatgccgtctttgtat
ttttctgagattggtattgcttctaaaattacagagttagttcaaaaaaatgctgaacaa
tccgcgttccctacatctgaaatccgaaaatttatcggtgatgctgaggaacgttttggt
gtttcatatgcagaaacgcaagtggacgccattgagaaggctattaactcagcagttatg
attttaacaggtggccctggtacagggaaaacgactgtagttagagggattgtagacgtt
tatgcagagcttcatggcttaactttaaatccaaaagactatattgaaaaagacgagcct
tttccgattgtattagtggcgccgacaggaagagcagctaagcgtcttagtgaatcaact
gaattaccggcgatgactattcaccgtttgcttggcttcactggacaagaaaaggaagag
gaaacggagaaggaagttggagggaggctcatcatcgtcgacgaaatgtcgatggtcgat
acatggctcgctcatcagttgttgaaatcgttaaatgacgattgccaagttatttttgtt
ggtgaccaagatcaattgccgcctgtaggtcctggacaagtgctaaaagatttacttgct
tctaaagcaattccaactgttgagttaactgatgtatatagacaagcagatggctcatca
attattgaacttgcccatcaaatgaaaaaaggcgagatgccacaaaacatgcttgcaaaa
acatccgatcgttcttttatccaagctggctccgaccaagtagctgatgtcatcaaacaa
gtcgtatcaagtgctgttaagaaaggcttctccattcatgatgtgcaaattttagcacct
atgtatagaggccctgcaggcattgatgctattaataaaatgattcaggaactagttaat
ccgaagaaaactgaaaagagtaaggaaataacatttggtgatgtgacgtatcgtattggt
gataaaattttacagcttgtcaatcaaccgaatagcaatgtctttaacggtgatatgggg
gaagtaattagtataatcaaagcgaatgagacaattgagaaacaagacttacttgtagct
tcatatgatggcattgaagtaacatatcaacgcggtgatttgaatcagatcactcttgct
tactgttgttcaattcataaatcacaaggtagtgaattccaaacagttattatgccagta
gtacgtggttattctaaaatgttgcgtaaaaacttgttgtatacaggaattacgagggca
aaaaacttcctcatactttgtggtgaaattgatgtgtttaagtatggtatgctaagaacg
gatgatcttcaaagaaacactactttagcacaacgtcttcaaatagaagaagttctagag
gcggttaaagattctgttgagccagaattggcgcaagtgtcagaaacaactaattcaaca
aatgtcgagccacaagaagagcaactatcgttggaatcacagtccttgaatactgataat
tatttagatattcatcctttaatcggcatgaaaggtataagtccttatgattttcttgaa
gaagagatttga
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