Virgibacillus sp. NKC19-16: KFZ58_00035
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Entry
KFZ58_00035 CDS
T08697
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
vik
Virgibacillus sp. NKC19-16
Brite
KEGG Orthology (KO) [BR:
vik00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vik03032
]
KFZ58_00035 (gyrA)
03400 DNA repair and recombination proteins [BR:
vik03400
]
KFZ58_00035 (gyrA)
Enzymes [BR:
vik01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KFZ58_00035 (gyrA)
DNA replication proteins [BR:
vik03032
]
Prokaryotic type
DNA Topoisomerases
KFZ58_00035 (gyrA)
DNA repair and recombination proteins [BR:
vik03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KFZ58_00035 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
NTase_sub_bind
Retrotran_gag_2
Motif
Other DBs
NCBI-ProteinID:
UJL46416
LinkDB
All DBs
Position
6989..9457
Genome browser
AA seq
822 aa
AA seq
DB search
MAEERSNVQGINLSKEMRTSFLDYSMSVIVSRALPDARDGLKPVHRRILYAMNDLGMHSD
KPHKKSARIVGEVIGKYHPHGDSAVYETMVRMAQDFSYRYMLVDGHGNFGSVDGDSAAAM
RYTEARMSKISMELLRDINKDTVDFQDNYDGTEREPAVFPARFPNLLVNGTSGIAVGMAT
NIPPHHLGETIDAVLALSENPEITIDELMEDYIHGPDFPTAGKILGKSGIRKAYETGKGS
ITIRAEANIEEQPNGKETIIVTELPYQVNKARLIEKIAEHVREKRIEGISDLRDESDRTG
MRIVIEIRRDSNANVVLNNLYKYTALQTTFGINTLALVGGQPKVLTIKQCLEHYLEHQKV
IIKRRTAFELRKAEARAHILEGLRIALDHLDEVITLIRNSKTTDIAKDGLMERFELSEKQ
SQAILDMRLQRLTGLEREKIENEYSELMDLIAELKAILASEEKVLEIIREELTEVKERFS
DKRRTEIAVGGADFFEDEDLIPEENIVITLTNKGYIKRLPASTYRRQNRGGRGIQGMGTN
EDDFVEHLVSTSTHDTILYFTNKGKVYKTKGYEVPEFNRTAKGIPIINLLQVEKGEWVNA
VISVNEFSEDYYFFFTTRHGISKRTSLSHFKNIRKGGLIAVGLREEDELISVRLTDGMKD
ILIATRNGYLIRFEESQIRTMGRTAAGVKGISLRGEDEVVSMEILEEGSNILHVTNKGYG
KQTPEEEYRRINRGGKGIFTSKLSDKTGHVVAVKAVSGHEDLMLITVAGVLIRIPVDSIS
ETGRNTMGVRLIRLQEEEEVATVTRIEEEEEHEVESDNSTDE
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggaacgatcaaacgttcaagggattaatctgagtaaagagatgcgtacatca
tttctggattattccatgagtgttatagtctcacgcgcattacctgatgcacgtgacgga
ttaaaaccggtacaccggagaattttatatgcaatgaatgatttagggatgcattctgac
aagccacataaaaagtcagcacgtattgttggtgaggtcattggtaagtatcatccacat
ggtgactccgccgtttatgaaacgatggtacggatggcacaagacttcagctatcgctat
atgctcgtagatggtcatgggaacttcgggtctgtagatggtgattctgcagctgccatg
cgttataccgaggcaagaatgtccaagatttccatggagttattacgagatattaataaa
gatacggttgattttcaggataactatgatggaacagaacgtgaaccagcagttttccct
gcccgtttcccgaatttactggtaaatggtacgtcaggaatcgcagtaggcatggcgaca
aacattccgccacatcatttaggtgaaacgattgatgcagtactggcacttagtgaaaat
cctgagataacaattgatgagctaatggaagactatatccatgggccggacttccctaca
gcagggaaaattttggggaaaagcggtattcgtaaagcatatgaaaccgggaagggctct
attacgatacgtgcagaagcaaatatcgaagaacagccaaatggcaaggaaacaatcatt
gttactgaattgccttatcaagtaaacaaggcaagactaattgaaaaaatagcagaacat
gttcgtgaaaaacgtatcgagggcatttcagatctacgcgatgaatccgatcgtacgggg
atgcgtattgtgattgaaatacgccgtgattccaatgcgaatgtcgttttgaataattta
tataaatataccgcactgcaaacgacgtttggtatcaatacactcgcactcgttggtggt
cagccaaaggtactgacaattaagcaatgcttagaacactatctcgaacatcaaaaggtg
atcatcaaacgcaggaccgcatttgaattacgtaaagcagaagcacgtgcccatatttta
gaagggttgcgtattgcgctggatcatttggatgaagttattaccctcatccgcaattca
aaaacgacggacattgccaaagatggtttaatggagcgctttgagttatccgaaaagcaa
tcacaagctattttggatatgcgcctgcaacgtttaactggtttagaacgtgaaaaaatt
gaaaatgaatacagtgaactgatggatctcattgctgaattaaaggctattttagcaagt
gaggaaaaagtactcgaaatcattcgggaagaactgacggaagtgaaagaacgctttagc
gataaacgtcgtacagaaattgcggttggtggggcagactttttcgaggatgaggattta
attcctgaggaaaatattgttattacccttaccaataagggatatatcaaacgtctgccg
gcatcaacctaccgcaggcagaatcgcggcggacgcggcattcaggggatgggtacgaat
gaggacgatttcgttgagcatctcgtctccacctccacgcatgatacgatattatacttt
acaaacaaaggaaaagtatacaagacgaaaggatatgaggttcctgaatttaaccgaacg
gcaaaaggtatcccgattattaatctgctgcaggtagaaaaaggtgaatgggtcaacgcc
gttatctcggtgaatgaatttagtgaggattactactttttctttacgacaagacacggt
atatccaagcgaacttccctttcccattttaaaaacatccgaaaaggtggcttaatcgcg
gttggattgcgcgaggaagatgaattgatttctgttcgactcaccgatggaatgaaggat
atcttaattgctacgaggaacggttacctcattcgatttgaggaatcccaaattagaacc
atgggaaggacagctgccggggtaaaaggtatttccctgagaggtgaagatgaggtcgtc
tccatggaaatcttggaggaaggatcaaacatccttcacgttaccaataaagggtatgga
aaacaaacaccggaagaagagtaccggcgaatcaaccgtggcgggaaaggtatttttaca
tccaaactatcggataaaaccggacatgtcgtcgcagtaaaagctgtatccggacatgaa
gatctgatgctgataacagtagcaggcgttctgatacgtattcctgttgatagtatttca
gaaaccggccgtaacacaatgggtgtacgcttaattcgcttacaggaagaggaagaagta
gcaaccgttacgagaattgaggaagaagaagagcatgaggtagaatcagataattcaacg
gatgaatag
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