Virgibacillus sp. NKC19-16: KFZ58_06760
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Entry
KFZ58_06760 CDS
T08697
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
vik
Virgibacillus sp. NKC19-16
Brite
KEGG Orthology (KO) [BR:
vik00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vik03019
]
KFZ58_06760 (yhaM)
Messenger RNA biogenesis [BR:
vik03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KFZ58_06760 (yhaM)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
UJL47564
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All DBs
Position
1291217..1292167
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AA seq
316 aa
AA seq
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MVKGIGYAAIGDVFDGYMLIKEATKGVASNGKPFLTLILRDATGEIDAKLWDASKEDETV
FIPEQIVRLGGEVNQFRGKAQLKIKSVRPAQPTDGVRVSDFVEKAPVEKEILSEKLTEVI
FEMENPVMQRIVRAFIKKYQEALLTYPAASKNHHEYVSGLAHHIVSMLAIARELHNLYPE
LNKDLLYAGIILHDLGKLKELSGVVTTSYTTEGKLLGHIPMMVEEIGLMAKELQIEGEEE
VLILQHLVLSHHGKAEWGSPKPPLVREAEILHLIDLMDAKMNMLNRALDKVKPGEFTERL
FAMDNRAFYKPLFEEK
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggtaaagggaattggatatgccgcaattggtgatgtgtttgatggttatatgttaatt
aaagaggcaaccaaaggtgttgcaagcaatggaaagcctttcttaaccttaattttgaga
gatgctacaggtgaaatcgatgcaaagctgtgggatgcgtcaaaagaggatgaaacggta
tttataccggaacaaatagtcagacttggtggtgaagtgaatcagttccgcgggaaggcg
cagctgaaaatcaagtctgtacgccccgcacaacctacagacggtgtccgggtctcagac
ttcgttgaaaaggctccggttgaaaaggaaattttatcggaaaagttaacagaggtaatt
tttgagatggagaacccagtaatgcagcgaatcgttcgggcatttattaaaaaatatcaa
gaagcattactaacgtacccggctgcttctaaaaatcatcatgaatatgtttccgggctg
gcccatcatattgtaagtatgcttgccattgcaagggagctacataatttataccctgaa
cttaataaggatttattgtatgcaggtattatattacatgatcttggcaagctaaaagaa
ttatcaggagtagtgacgacaagctatacaacggaagggaagttgttaggacatattcct
atgatggtggaggaaatcggtttaatggcgaaagaactgcaaattgaaggagaagaagaa
gtattaattctacaacatttagtattaagtcatcatggaaaagcagaatggggaagtcca
aagccgccattagtccgtgaagcagaaatcctgcatctcattgatttaatggatgcaaaa
atgaatatgttaaatcgtgcgttagataaagtgaaaccgggtgaatttacagaacgatta
tttgctatggataaccgggcattttataaacctctattcgaggaaaaataa
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