Virgibacillus sp. MSP4-1: GWK91_11110
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Entry
GWK91_11110 CDS
T06398
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
vim
Virgibacillus sp. MSP4-1
Pathway
vim00521
Streptomycin biosynthesis
vim00523
Polyketide sugar unit biosynthesis
vim00541
O-Antigen nucleotide sugar biosynthesis
vim01100
Metabolic pathways
vim01110
Biosynthesis of secondary metabolites
vim01250
Biosynthesis of nucleotide sugars
Module
vim_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
vim00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
GWK91_11110 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
GWK91_11110 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
GWK91_11110 (rfbC)
Enzymes [BR:
vim01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
GWK91_11110 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QHS23471
UniProt:
A0A6B9YF81
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Position
complement(2226753..2227313)
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AA seq
186 aa
AA seq
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MEFIKTKLEGVVIIEPAVHGDHRGWFMESYNQKDFEQAGINLNFVQDNHSFSATKGTLRG
LHYQSNPKAQTKLVRCTKGSIYDVAIDIRKGSPTFGEWVGVELTAENKKQFLIPKGFAHG
FMTLTEDAEVQYKVDEFYAPECDRGILWNDPVIGIEWPMDVTPVLSEKDKNAPTLNEADN
NFIYGE
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atggagtttattaaaacaaaattagaaggtgtagtgattattgagcctgctgtacacgga
gaccatcgtggctggtttatggaatcctataatcaaaaggattttgagcaagcgggcatt
aatctgaattttgttcaggataaccattcattttctgcaaccaaaggcactttgagaggt
ttacattaccagtctaatccaaaggctcaaacaaaattagtacgatgcacgaaaggatcc
atttatgacgtggcaatcgatatccgtaaaggaagtccaacttttggtgaatgggtcggt
gttgaattaacggctgagaataagaaacaattccttattccaaaaggatttgcccacgga
tttatgacattaacggaagatgcagaagtgcaatataaggtagatgaattctatgcacca
gaatgtgaccgtggaatcctgtggaatgatcctgtcattgggattgaatggccaatggat
gttacgcctgttttatcggaaaaagataaaaatgctccaacactaaacgaagccgataat
aattttatttatggagagtaa
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