Virgibacillus sp. SK37: X953_10620
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Entry
X953_10620 CDS
T03219
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
vir
Virgibacillus sp. SK37
Pathway
vir00300
Lysine biosynthesis
vir00470
D-Amino acid metabolism
vir01100
Metabolic pathways
vir01110
Biosynthesis of secondary metabolites
vir01120
Microbial metabolism in diverse environments
vir01230
Biosynthesis of amino acids
Module
vir_M00525
Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine
vir_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vir00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
X953_10620
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
X953_10620
Enzymes [BR:
vir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
X953_10620
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
QRPTase_C
Motif
Other DBs
NCBI-ProteinID:
AIF43524
UniProt:
A0A075JNN5
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All DBs
Position
1937286..1938593
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AA seq
435 aa
AA seq
DB search
MIIDNHPFKVNELGHLEVGGIDTTYLAQKYGTPLYVYDVKLIRDNCRAFVQTFKNMNVNA
KVAYASKAFSSIAMLQVIKQENLCLDVVSEGELYTAIQADFPTEKIHMHGNNKSEEELTM
AIENSIGCIVIDNFNEIQLLETLLEKHDKRMDVLLRVTPGIESKTHQYIMTGNEDSKFGF
NLNNGQAEKAFCLLHEHPRIHFRGLHCHIGSQIFETDRFLIAVELLFQELNTWKEKHGYT
PEVLNLGGGFGIRYTKNDHPIPYEFYVEELVKAVREHSTRMGIPVPEIWLEPGRAIVGNA
GITLYTIGSQKNIPGMRDYISINGGMTDNLRPALYQAKYEGVIANKASHPPVKDVSVAGK
CCESGDMLIWDLPVPEVNNGDVLAVFSTGAYGYSMANHYNRLPKAAVVFVEDGIEKLVVR
RESYTDVTKNDLHYV
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgattattgataatcatccctttaaagtaaatgaactaggtcatttagaagttggtgga
atagatactacttatttagcacaaaaatatggaacacctttatatgtctatgatgttaaa
ttaatccgtgacaattgcagagcttttgttcaaacatttaaaaacatgaatgtaaacgct
aaagtagcatatgcgagcaaagctttttcatctattgcgatgcttcaagtaataaaacag
gaaaacctatgcttggatgttgtctcggaaggtgaattatatactgcaattcaggctgat
ttccctacagaaaaaatccatatgcatggcaataataaaagtgaagaagaacttacaatg
gctattgaaaatagcattggttgtattgttatagataattttaatgaaatccaattactg
gaaacattactcgaaaagcatgataaacgaatggatgtacttcttcgggtaacaccgggt
attgaatcaaaaacacatcaatatattatgactggaaatgaggattccaaatttggcttt
aatttaaataatggacaagctgaaaaagccttctgtttattacatgaacaccctaggatc
cattttaggggattgcattgccatatcgggtcacaaatttttgaaactgatcgcttttta
attgctgtagagcttttatttcaggagttaaatacttggaaagaaaaacatggttatacc
ccagaagtattgaatttggggggcggctttggtattagatatacgaaaaacgatcaccct
attccttatgaattctatgtagaggaattagtcaaagcggtccgtgaacactccactaga
atgggaatacctgtgcctgaaatttggcttgagcccggaagagctatagtaggaaatgca
ggaatcaccctgtatacaataggatctcagaagaatattccgggtatgagagattatata
tcaattaacggcggaatgacggataatctgcgtccagcgttgtaccaggctaaatatgaa
ggagttattgcgaataaagcttcacatcctcctgtgaaggacgtctccgttgctggtaaa
tgttgtgaatccggtgatatgctaatctgggacttgcctgttccagaagttaataatggt
gacgtgcttgccgtattttctacaggtgcttacggctattccatggctaatcattataat
cgtttgccaaaggcagcggtagtgtttgtagaggatggaattgaaaaattagttgtacgt
cgagaaagctatacagatgttacaaaaaacgatttacattacgtttaa
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