Varroa jacobsoni: 111262647
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Entry
111262647 CDS
T07417
Name
(RefSeq) general transcription factor IIH subunit 2-like
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
vja
Varroa jacobsoni
Pathway
vja03022
Basal transcription factors
vja03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111262647
09124 Replication and repair
03420 Nucleotide excision repair
111262647
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vja03021
]
111262647
03400 DNA repair and recombination proteins [BR:
vja03400
]
111262647
Transcription machinery [BR:
vja03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
111262647
DNA repair and recombination proteins [BR:
vja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
111262647
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
Motif
Other DBs
NCBI-GeneID:
111262647
NCBI-ProteinID:
XP_022692789
LinkDB
All DBs
Position
Unknown
AA seq
412 aa
AA seq
DB search
MAEEEEQQGYRWESEYERTWEAIQEDESGNLQASVQDIVHKTRRHHLLLQKNVRLGMMRH
IYIVLDLSSSMNDTDLKPTRMQCVLHQMENFVDRFYDENPISQMAIVATSNKRAEKISDL
SGNPLKHKEGLAKLKDRLPVGEPSLQNSINMAANVLQHMPAHSSRELIIILGSLTTCDPS
DIGTTISEAKQLGLRCSVIGLAAEVHVCRQLTKTTGGSYQVVMDEEHLGELLSTHLLPPP
ALSNVECSLVRMGFPYHRSEHEDAPSLCHCHLESASGDSGHHLSSGGYFCPQCKSKYCEL
PVECRCCGLTLVSAPHLARSYHHLFPLDNFEETPLQKGEVRTCFACMCSVEGQSMYKCGS
CHEFFCLDCDIFVHSTLHVCPGCACKPLVTTGGTASSSLPLSHEVASSQREH
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggaggaagaacagcaaggctaccgttgggagtccgaatatgagaggacttgg
gaggctatccaagaagatgaaagtgggaacctacaagcaagtgtacaggatattgtccat
aaaacaaggcgacaccatctgcttctccagaagaatgtccgacttggaatgatgcgccat
atttacatcgtacttgatctctcgtcatcaatgaacgatacagatttgaaaccgactcga
atgcagtgcgttttgcaccaaatggaaaactttgtcgatcgtttctacgatgagaatccc
atctcgcagatggccattgttgccacttcaaacaagcgggctgaaaaaatatcggatttg
tcgggaaatccgctaaaacacaaggaaggtctagcgaaacttaaggaccgccttccagtc
ggggagcccagtctacaaaacagcatcaatatggctgcgaatgtccttcaacatatgccg
gcacacagcagtcgcgaactaattatcattcttggaagtttgacaacgtgtgacccttcg
gatattgggaccacaattagtgaagccaaacagctgggtctgcgttgttccgtcattggg
cttgccgctgaagttcacgtgtgtagacaacttaccaaaactacaggcggctcgtatcag
gtcgtgatggatgaggaacatctgggggagctcttgagtacgcatctcctacctccgccg
gcactgagtaatgttgaatgctcccttgttcgtatgggatttccctatcaccgatctgaa
catgaagatgcaccgtcactatgtcactgccatttagagagcgcaagtggcgacagcgga
caccacctgtcctccgggggctatttttgcccccaatgcaaatcgaaatattgcgagctc
ccagttgaatgccgttgttgtggactcactttggtatcggctccgcatttagcacggagc
tatcatcacctgtttcctttggataactttgaggagacaccccttcagaaaggtgaagta
aggacttgcttcgcgtgtatgtgctccgtggaaggccaaagtatgtacaaatgtggatca
tgtcatgaattcttttgtctcgactgtgacatatttgtccattcgaccttgcacgtctgc
ccaggctgcgcctgcaagccgctggtaacaacaggcggtacagcctcgtcatctttgcca
ttgagtcacgaggtcgcgtcatcacaacgggagcattag
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