Varanus komodoensis (Komodo dragon): 123017039
Help
Entry
123017039 CDS
T07701
Symbol
IFIH1
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko04622
RIG-I-like receptor signaling pathway
vko05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
123017039 (IFIH1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
123017039 (IFIH1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
vko04054
]
123017039 (IFIH1)
Enzymes [BR:
vko01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123017039 (IFIH1)
Pattern recognition receptors [BR:
vko04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
123017039 (IFIH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
CARD_2
Helicase_C
DEAD
ResIII
SWI2_SNF2
SNF2-rel_dom
AAA_22
DUF3638
Anoctamin_N
Motif
Other DBs
NCBI-GeneID:
123017039
NCBI-ProteinID:
XP_044273998
Ensembl:
ENSVKKG00000010367
LinkDB
All DBs
Position
Unknown
AA seq
985 aa
AA seq
DB search
MEEAAAAAASPSHDESILYLISCFRSRIKNSIQVNRVMDFMPSLSHEHKDRLRAAQRNQG
DVEAAELLLQLLENGAARSPGMCQEFCQALAQGGFLAADYVDPSLRGLPSPAAEAVNDLG
RYLVDVFFGHLVQALRALQVAMKCLQMNLLDDQDLQQIKAVEDTRENGEAVRELLYRVMQ
KKHWFSPFLQALEEAGHPHVAAELRGHKNEPCERETSSDNLTTSDEALASATQEDLKQDA
KLQPNVADEENASGESFGEASASSDDLGNGDKRASPEPQLCLRDYQMEVAKPALEGKNII
LCLPTGSGKTRVAVYVAKDHLDKKRNAKEDGKVIVLVNKVPLVEQHFQKEFYPHLKHSYH
VTRLSGASQLKISFPEVVRSSDVIICTAKILENALENADKDEEEGVQLSVFSLIVIDECH
HTHKEAVYNNIMRRYLKVKRKNEKRMKEGKPLIPQPQVLGLTASPGVGNAKNASKAEEHI
LKICANLDAAGIMTVNEHDFQLNNQVKDPSRKFETAEEKGQDPFKEKLINIITEIQAYCK
FNPNADFGSQPYEQWAVQEEKKAAKEGNRKARVCAEHLKKYNDALLINDTIRMADAYNHL
NNFYKEEKSKKVAVNEDSEDIPMAPKPDETDTFLIDLFYANKKELQKLATNVQYENNNLA
KLRSTLMDEFTKTPETRGIIFTKTRQSAFALCQWIKEIAKFEEIGVKAHYLIGAGHSSEF
KPMTQNEQREVIEKFRTGKINLLIATTVAEEGLDIPECNIVIRYGLITNETAMIQARGRA
RAEESTYVLVASSGSKAIERENVNIYREKMMHKAIKRVQNMSQEDYLHKIKSFQLQSIME
LKMKAKKQQCKTYKENPSLVTFLCKNCMKQTCSGEDIQVIDDMHHINVKKEFENLYIVRE
NKTLQAKEADYQANGEIICKDCRQTWGNMMVHRGLDLPCLKIKNFVVVFKNSKSTSNKIF
SRWGELPIKFPVFSYVDRYASSDED
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggcggcggcggcggcggcgagtccatcccacgacgagtccatcctctacctg
atttcttgcttcaggtccaggatcaagaatagcattcaggtgaatcgagttatggacttc
atgccgtccttgagccacgagcacaaggatcgcctccgagcggcccagcggaaccaaggg
gacgtcgaggccgcggagctgctgctgcagctcttggagaacggagctgcgcgctcgccg
ggcatgtgccaggagttctgccaggcgctggcgcagggcggctttctggccgccgactac
gtggaccccagcctgcgcgggctgccctcgcctgccgccgaagcggtcaacgacctgggc
aggtacctggtggacgtgttcttcggccatttggtgcaggcgctgcgggccctgcaggtg
gcgatgaagtgtctgcagatgaatctcctcgacgaccaggacctgcagcagattaaagct
gtggaagatactcgagagaatggagaggcagtgagggaactgttgtacagagtaatgcaa
aagaagcactggttttcaccatttctgcaagcactggaggaagcaggacacccacacgtt
gcagccgaactaagagggcacaaaaatgaaccttgtgaaagggagacctcttcagataat
cttactacaagtgatgaggctcttgcttctgcaactcaggaagatctgaagcaggatgct
aagctgcagcccaatgtggctgatgaggagaatgcctcaggggaatcatttggagaggcc
tcagcaagttcagatgatcttgggaatggagacaaaagagcttcacctgaaccccagctg
tgtcttagagactaccagatggaggtggccaaaccagccctggaaggaaagaatattatc
ctgtgcctgcctacaggcagtggcaagacccgagtggctgtttatgttgctaaagaccat
ttggacaagaagagaaatgcaaaagaagacgggaaagttatagtgcttgtcaacaaggta
ccattggttgaacagcatttccagaaagaattctatccccacttgaagcattcctaccat
gtgactaggctgagtggcgcatctcagttgaaaatctcattccctgaggttgtcagaagt
tccgatgtcattatctgcacagctaaaattcttgagaatgcgttggaaaatgcagacaaa
gatgaagaagaaggagtccagttatcagtattctccttgattgttattgatgaatgccat
catacacacaaggaagctgtctataacaatatcatgcgccgctatttgaaagtcaagagg
aagaatgagaagcgaatgaaagagggcaagccactgattcctcagccacaggttctgggg
ctcacagcttcacctggtgtaggaaatgcaaaaaacgcatcaaaggctgaggaacatatt
ctgaaaatatgtgccaatcttgatgcagctgggattatgacagttaatgagcatgacttc
caactgaataatcaagtgaaagatccctctaggaagtttgagactgcagaggagaaaggg
caggatccttttaaagagaaactcataaacataataacagagatccaggcttattgcaag
ttcaacccaaatgctgattttggatctcagccttacgaacagtgggcagttcaagaggag
aagaaagctgctaaagaaggaaatcgcaaggcgcgtgtctgtgcggaacatttgaagaaa
tacaatgatgccttgctaatcaatgacacaattcgaatggctgatgcatataaccatctc
aacaacttttataaagaagagaagagtaagaaggtggcagtgaatgaggacagtgaggat
atacccatggcaccaaaaccagatgaaacagatacatttcttatagatttattttatgcc
aacaagaaggaactgcagaagttggctactaatgtacaatatgaaaacaacaacttggca
aagttgcgctcaacactgatggatgagtttacgaaaacacctgaaacaagaggaatcatt
ttcacaaagactcggcaaagtgcatttgccctgtgtcagtggattaaagaaatagccaaa
tttgaggaaattggagtgaaggctcactaccttatcggtgctggacatagcagtgaattt
aagcccatgactcagaatgaacaaagagaagtcattgaaaaattccggactggaaaaatc
aatctacttattgctactactgttgcagaagaaggcctggatattccggagtgtaacatt
gttatacgctatggtctcattaccaatgaaacagctatgatacaggctcgtggcagagct
cgagcagaggaaagtacctatgtactcgtggcatcaagtgggtcaaaagctattgaacga
gaaaatgtcaatatctaccgtgagaaaatgatgcacaaagcaattaagcgtgtccagaat
atgtcccaagaagactatttgcataagattaaaagcttccaattgcaaagtataatggag
ttaaaaatgaaagctaagaaacaacagtgtaaaacatacaaggaaaatccatccttggtt
acattcctctgcaaaaactgtatgaagcaaacatgttctggagaagacattcaggttatt
gatgacatgcatcatatcaatgtgaaaaaggaatttgagaacctttatatagtaagagaa
aacaagaccctgcaagcaaaagaagccgattatcaggcaaatggggaaatcatctgcaaa
gactgtagacaaacttggggaaatatgatggtacaccgaggcttggatctaccctgctta
aaaataaaaaatttcgtggttgtattcaaaaacagcaaaagtacttcaaacaaaatcttc
agtagatggggagagctgcccattaagtttcccgttttcagttatgtagatcgatacgca
tccagtgatgaagattaa
DBGET
integrated database retrieval system
