Varanus komodoensis (Komodo dragon): 123023623
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Entry
123023623 CDS
T07701
Symbol
USP1
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 1 isoform X1
KO
K11832
ubiquitin carboxyl-terminal hydrolase 1 [EC:
3.4.19.12
]
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
123023623 (USP1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vko01002
]
123023623 (USP1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vko04121
]
123023623 (USP1)
03400 DNA repair and recombination proteins [BR:
vko03400
]
123023623 (USP1)
Enzymes [BR:
vko01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
123023623 (USP1)
Peptidases and inhibitors [BR:
vko01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
123023623 (USP1)
Ubiquitin system [BR:
vko04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
123023623 (USP1)
DNA repair and recombination proteins [BR:
vko03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
123023623 (USP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Exop_C
Motif
Other DBs
NCBI-GeneID:
123023623
NCBI-ProteinID:
XP_044286445
Ensembl:
ENSVKKG00000012133
LinkDB
All DBs
Position
Unknown
AA seq
823 aa
AA seq
DB search
MCAFPSNRRTVFTVLMCEIYISPFLRGAQKAQEPPLLRYPHNSLVREGKMPGVLPSDSTG
LSRSTPMKKSRLSLKFFQKRETKRALDFAETTENEQKTSEYECSKIDQVVPAAQLFSPIY
CEKKNNMLPFVGLNNLGNTCYLNSILQVLYFCPGFKIGVKQLFNIISNKKDNLKNEIDKG
TIKEDSLASCELVCSLHSLIISVEQLQASFLLNPDKYTDELATQPRRLLNTLRELNPMYE
GYLQHDAQEVLQCILGHIEVTCQLLKEAIKPKSLEEPIDEPRKNCYPDMDSIGIDVEDGG
IVHDQAIKECEDKANGNAKRKSDMEGGNEKKKYKISKEKTGVGENLRQTRSKRKVLVEKQ
ENQTEITIKHFIESENIKPTHKKSRLRLNWLKSSTNQPSILSKFCSLGKLRTNLGYKDLN
KEIDGCEFTDHFNCENSNQTREEHCDPSSPVEITVEKGIEKQCKTELAVSSLVERLFQGQ
LVLRTRCLECECFTERREDFQDISVPVQKDELTKVEENSEISPEPKTEVKTLKWAISQFA
SVERIVGEDKYFCENCCHYTEAERSLLFDKMPEVITIHLKCFAASGLEFDCYGGLSKINT
PLQTPLKLSLDDWSINPANEIYGLFAVVMHSGVTISSGHYTASVKLTNLASLELDKYNFI
SDPVCPEPSNEEARAVTEDYDDGEVSFRISGNAQANKGLNKKNIEAVGLLGGQKSKSSCD
LPSSKATHSEKMTNVTGMKHANCNHAKSIMEPEHCEQTGTVSNGLENKVMHIMQSLKEYE
GKWLLFDDSEVKVTEEKDFLDLLSPISSSASTPYLLFYKKIAE
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgcattcccttccaacaggcggacagtatttactgtgcttatgtgtgaaatttat
atttcgcctttcctgcgaggagcacaaaaggcacaggagcctcctctcctacgttatcct
cacaacagccttgtgagggagggaaaaatgccaggtgtgttgcccagtgacagtactgga
ctttcaagaagcaccccaatgaaaaaaagcagattgtcactgaagttttttcagaaaaga
gaaacaaaaagagccctggattttgcagaaacaacagaaaatgaacaaaagacttcagaa
tatgaatgttctaaaattgatcaagtagttcctgcagcacagctgttttctcctatttac
tgtgagaagaaaaacaacatgctgccttttgtgggcttaaacaaccttgggaacacttgt
tatcttaacagcatacttcaggtgctttatttttgtcccggctttaaaattggagttaaa
caattatttaatataatatcaaacaagaaggacaacttaaagaatgaaattgataaggga
accattaaagaagattctcttgcaagctgtgaactggtctgcagtttacactctttgatt
atttcagttgaacagcttcaggccagctttctgttaaatccagataaatatacagatgaa
cttgctactcaaccgagaaggctactaaacacactcagggagctcaaccccatgtatgag
ggatatttacaacatgatgcccaagaagtattacagtgtatattggggcacatcgaagta
acatgtcagctcttgaaggaagcaataaaacccaaatctctagaagaacctatagatgaa
ccaagaaaaaactgttatccagatatggacagtattggcattgatgtggaagatggtggt
atagtgcatgaccaagctataaaggaatgtgaagataaagctaatggaaatgcaaagaga
aaaagtgatatggaaggtggcaatgaaaagaaaaaatacaaaatctccaaagagaaaact
ggagtaggagaaaacctgagacagacccgctcaaagagaaaagtactggtagaaaaacag
gagaatcaaactgaaattaccattaagcatttcattgaaagtgaaaatataaagccaact
cataaaaaatcaagacttcgattaaattggttaaaatcttcaaccaaccaacctagcatt
ctgtctaaattttgtagtctgggcaaactgagaacaaacttggggtacaaagacctgaat
aaagaaattgatggctgtgaatttacagatcatttcaactgtgaaaatagtaaccaaaca
agagaagaacattgtgatccatcatcacctgtggaaattactgttgaaaaagggattgaa
aaacaatgcaagacagagttagccgtttccagtttagtggaaagactcttccagggtcag
ttggtattgcgaacaagatgtttagagtgtgagtgtttcactgagagaagagaagacttt
caagatatcagtgtaccagttcaaaaagatgaactcacaaaagtggaagagaattctgaa
atttccccagagcctaaaacagaagtgaagactctcaaatgggcaatttcacagtttgct
tctgtggagcgaattgtgggagaagataaatatttctgtgaaaactgttgccattacaca
gaagcagaacgtagtcttctatttgataaaatgcctgaagttataacaatccacttgaag
tgctttgctgctagtggtttagagtttgattgttatggtgggctctccaagataaacact
cctttacagacaccactcaagctgtccttggatgactggagcataaacccagccaatgaa
atctatggattatttgctgtagtgatgcacagtggcgttactatcagcagtgggcactac
acagcctctgttaaacttacaaatcttgctagcttagaattagacaaatataatttcatc
agtgatcctgtttgtccagagccatcgaatgaagaagctagagctgtcactgaagactat
gatgatggtgaggtatcttttagaatcagtggaaatgcccaagcaaataaaggattgaac
aaaaagaatatagaagcagttgggcttcttggaggacaaaaaagcaaatccagttgtgat
ttgcccagtagcaaagcaacacattctgagaagatgactaatgtcactggaatgaaacat
gctaactgcaaccatgctaaaagtatcatggagcctgaacattgtgagcagactggtact
gtttctaatggactagaaaataaagtaatgcacataatgcagagcctgaaagaatatgag
ggaaagtggctactttttgatgattctgaagtgaaggtcacagaggaaaaagactttctt
gacttgttgtcccccatttcatcatctgcatctactccatacctgctattttataagaaa
attgcagagtga
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integrated database retrieval system
