Varanus komodoensis (Komodo dragon): 123035739
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Entry
123035739 CDS
T07701
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123035739 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vko03041
]
123035739 (DDX46)
Enzymes [BR:
vko01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123035739 (DDX46)
Spliceosome [BR:
vko03041
]
Complex A
U2 snRNP components
U2 related factors
123035739 (DDX46)
Complex B
123035739 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
123035739
NCBI-ProteinID:
XP_044310172
Ensembl:
ENSVKKG00000014356
LinkDB
All DBs
Position
Unknown
AA seq
1050 aa
AA seq
DB search
MGRESRSTKQQLSKQKQHYRKRSSSRGRSGSRSRSRSPPDKRAKRGDDRRSRSRDRDRRR
ERSRSRDKRRSRSRDRKRVRRSRSRERERSRERRRSRSRERRRSRSRSRGRRSRSSSPGK
NKKVENRSRSKEKIEGVEVNKEKKKEKEDKEEEKDKDVNNFDQNKLEEEMRKRKERVEKW
REEQRKKAMENIGELKKEIEEMKQGKKWSLEDDDDDDEETAEGEKEGNEIEDEELDPLDA
YMEEVKEEVKKFNMRSVKGGGGSEKKSGPTVTKVVTVVKTKKASPETEKKKGELMVNDQD
AMEYSSEEEEVDLQTALTGYQTKHRKLLEPVDHGKIEYETYRKNFYVEVPELAKMSQEEV
NTFRMEMEGITVKGKGCPKPIKTWVQCGISMKILNSLKKHGYDKPTPIQAQAIPAIMSGR
DLIGIAKTGSGKTIAFLLPMFRHIMDQRQLEEGEGPIAVIMTPTRELALQITKECKKFSK
TLGVRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDE
ADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVC
SDVEQHVVVIEEENKFLKLLELLGHYQEKGSVIIFVDKQEHADGLLKDLMRASYPCLSLH
GGIDQYDRDSIINDFKSGVCKLLVATSVAARGLDVKHLMLVINYSCPNHYEDYVHRAGRT
GRAGNKGYAYTFITEDQARYAGDIIKAFELSGTAVPSELEKLWTDFKDQQKAEGKTIKKS
SGFSGKGFKFDETEEALANERKKLQKAALGLQDSDDEDTAVDIDEQIESMFNSKKRVKDM
ASSGGTSNVPAPTAGNAEKLEIAKRLALRINAQKNLGAEAQVSVSFQFKDVMQQATNAIL
RGGTIQAPTVSAKTIAEQLAEKINAKLNYVPIEKQEEEKQEGGQNESFKRYEEELEINDF
PQTARWKVTSKEALHRISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKA
KAEITRLIKEELIRLQNSYQPTNKGRYKVL
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgggagtccagatcaacaaagcaacagttgtccaaacaaaaacagcattatcgg
aagcgctcctcatcacgagggcgctctggtagccgttctcgaagtcgttctccacctgac
aaaagagcaaaacgtggagatgataggcgctctagaagcagggacagagatcgcagacgt
gagagatcacggagcagggacaagaggagatctcgatcacgtgataggaaacgtgtgagg
cgttcaagaagcagagagagggaacgaagcagggagaggagacgatcccgtagtcgagag
agaagaagatccagaagccgaagcagagggagaaggtcccgatcttccagccctggcaag
aacaaaaaagtagaaaacagatcacgatctaaagaaaagatagaaggtgtggaagttaac
aaagaaaagaaaaaggagaaagaggacaaagaagaagaaaaggataaagatgtaaataat
tttgatcagaacaaattagaagaagaaatgagaaaacgaaaagaaagagtagaaaaatgg
agagaagaacagcgcaagaaagctatggaaaatataggagaactgaaaaaagaaattgaa
gagatgaagcaggggaagaaatggagcttagaagatgatgatgatgatgatgaagaaaca
gcagaaggagaaaaagaaggcaatgaaattgaagatgaagaactagatccattagatgca
tatatggaagaagtaaaggaagaggtcaagaaatttaatatgaggagcgtaaaaggtggt
ggtggaagtgaaaagaaatctgggccaacagttactaaagtagtaactgtggtgaaaact
aaaaaggcatctccagagaccgaaaagaaaaaaggagaactcatggtgaatgaccaagat
gcaatggagtattcctctgaagaggaggaagttgatctccagactgcattaacaggctac
cagaccaaacataggaagttactagaaccagtggatcacgggaagattgaatatgagact
tacaggaaaaatttctatgttgaagttccagagctggctaaaatgagtcaagaagaggtg
aatacatttaggatggaaatggaaggaattacagtcaagggtaaaggatgtcctaagcca
atcaaaacctgggtgcagtgtggtatttctatgaaaattctgaattccctgaaaaagcat
ggctatgacaaacccacccctatccaagcccaagctatacctgcaattatgagtggacgg
gatttaattggcattgctaaaacgggaagtggaaaaaccattgcttttctgttgcccatg
ttcagacacatcatggatcagagacaattagaagaaggggaaggcccaatagctgtcatt
atgactcctacacgagagttggctttgcagattacaaaggagtgcaagaagttctccaag
acacttggggttagagttgtttgtgtatatggaggaacaggaataagtgaacagattgct
gaactgaaaaggggtgctgaaattatcgtttgcacacctggccgtatgattgatatgtta
gcagctaataatggccgggtgacaaatcttcgaagagtgacatatgttgtccttgatgaa
gctgatagaatgtttgacatgggctttgagcctcaggttatgcgcattgtagacaatgtg
agacctgaccggcagacagttatgttctctgctaccttccctagagccatggaggcttta
gctcgtcgaatactaagtaagccaattgaagtccaagttggtggcaggagtgttgtctgt
tctgatgtggaacagcatgtggttgtcatagaggaagagaacaagtttttgaagttactt
gaattactaggacactatcaggaaaaaggatctgtcattatatttgtagataaacaagaa
catgcagatggattgctgaaagacttaatgagagcttcttatccttgcttgtcacttcat
ggaggcattgaccagtatgatagagatagtataatcaatgattttaagagtggagtgtgt
aaactacttgttgccacatctgtagcagcccgtggtcttgatgtaaaacatctcatgctt
gtcatcaactacagctgccccaatcattatgaggattatgtgcacagagcaggcagaact
ggacgagcaggcaacaaaggatatgcgtatacttttataacggaagatcaagcacggtat
gctggtgatataattaaagctttcgagttatcaggtactgcagttccttctgagctagaa
aagctttggactgatttcaaagatcagcaaaaggctgaagggaagacaattaaaaagagt
agtgggttctctggtaaaggcttcaagtttgatgaaacagaagaagctttggctaatgag
agaaagaaactgcaaaaagctgcacttggtttgcaggattcagatgatgaagatactgca
gtggatattgatgaacagattgaaagcatgttcaattcaaagaaaagagtgaaggacatg
gcatcatctggtggaacatctaatgttcctgccccaacagcaggaaatgcagaaaaatta
gaaatagcgaaaagattagcattgagaatcaatgcacagaagaatcttggagctgaggca
caagtatctgtctcttttcaatttaaggatgttatgcagcaagctacaaatgctatcctg
agaggtggtacaattcaggctccgacagtatctgctaagacaattgcagaacaactggct
gagaagatcaatgcaaagctcaattatgtgcccatagagaaacaagaagaggagaaacag
gaaggaggacaaaatgaatcctttaagagatatgaagaagaactggaaattaatgatttc
ccacagactgctaggtggaaagtaacatcaaaggaggcactacacagaataagtgaatat
tctgaagctgccattacaatcagaggaacatactttcctccaggcaaagaacccaaggag
ggagaacgaaaaatttacttggctattgagagtgccaatgaactggctgtgcaaaaagca
aaagcagaaattacaagacttatcaaagaagagcttatcagattgcaaaattcataccaa
ccaaccaacaaaggaagatacaaagttttataa
DBGET
integrated database retrieval system
