Candidatus Vallotia lariciata: GKR41_00193
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Entry
GKR41_00193 CDS
T07905
Symbol
secD
Name
(GenBank) Protein translocase subunit SecD
KO
K03072
preprotein translocase subunit SecD
Organism
vla
Candidatus Vallotia lariciata
Pathway
vla03060
Protein export
vla03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
vla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
GKR41_00193 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
GKR41_00193 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vla02044
]
GKR41_00193 (secD)
Secretion system [BR:
vla02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
GKR41_00193 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD-TM1
SecD_1st
SecD_SecF
MMPL
Sec_GG
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
UDG82846
LinkDB
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Position
complement(244386..246248)
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AA seq
620 aa
AA seq
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MNRYPPWKNVVMLLALAVGFLYTLPNFFGEVPGVQISSGSATVKLDSSVLDTVESTLNEN
DVHANNIIFDSRNQNPTIYLQVKDTDTQLRVKDLLQKTLNTDPNDPTYIVSLNLQSASPR
WLSALHALPMHLGLDLRGGVHFLLQVDLHDALNKRLDSDATDGRILLHDKSIDDSYVNRI
GQTVVVNCKNQDDASRAYHLLADNITELSWHLLPVSHDYKVVGKFALGVQKIVLDSALKQ
NILTLNNRVNELGVAEPIVHRQGEDRIVVELPGVQDTAKAKDIIGRTATLEARMADYPNP
VRSIKSPAPDGYDLFTQGNGAPIYLKKQIIFTGHRITDASVDFDEHQRPSVKIRLDAHGG
QVLRDVSRNNINKMMAIVLFEKNRSEILTVATIRSELGENFQITGQLTPQAATDLALLLR
AGSLAAPMEIIEERTLGPSVGLDNIRKGFNSVQYGFLAITVFIISYYMLFGLISVIALSV
NLFLLVAALSIIRATLTLPGIAAIALTLGMAIDANVLINERIREELRHGASAQLSIQNGF
LHAWVTILDSSITMLIAGLALLTFGSGPVRGFAVVYCIGILTSMFSAVFFARGLVNIWYG
KKKRLKSLAIGQIWSPKDYT
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgctaccccccttggaagaatgttgtaatgctactagcacttgctgtaggcttt
ctatatacgttaccaaacttttttggtgaggtaccgggggtgcagatatccagcgggtca
gcgactgtcaagctagattcatcagtacttgataccgtcgagtcaacgctcaatgagaat
gatgtacatgctaataatatcatcttcgacagccgaaatcagaatccaactatttacttg
caggtaaaggataccgatacgcaattacgcgtaaaagacctgctgcaaaaaacgctaaat
accgatccgaatgatccaacttatattgtctcgctaaacctacaatcagcttctcctcgc
tggctatctgcactccacgcactaccgatgcatctaggtctggatctccgcggtggagtg
cacttcctattgcaggtggacttgcatgatgcattgaataaaaggctagattcggacgcg
accgatggtcgtatactgctacacgacaaatcaatcgacgatagctatgtaaatcgcatt
ggccagacagtggtagtcaactgtaaaaatcaggatgatgcaagccgcgcttaccatcta
ctggcggataatattaccgagttaagttggcatcttcttccggtgtcacacgactataaa
gtagtaggaaaatttgcacttggtgtacaaaaaatagtgctagacagtgcactaaagcaa
aatattttaactctaaataatagagtaaacgaactgggtgttgcagaaccaattgtgcat
cggcaaggcgaagaccgaattgttgttgagctacccggcgttcaagataccgcaaaagct
aaagatattattggtcgaaccgccacgcttgaggctcgtatggctgattacccaaatccc
gtacgcagtattaaatctcccgcaccagatggttatgatctattcacacaaggcaatgga
gcaccaatatacttaaaaaagcagataattttcacaggtcatcgaattaccgatgcatca
gtcgattttgatgagcatcaacgtccatcagtgaagatccgacttgatgcccatggtgga
caggtattgcgtgacgtgtcacgtaataatattaacaagatgatggcaatcgtattattc
gaaaagaacaggagtgaaattttaactgtagcaactatccgatctgagctgggagaaaac
ttccagattactggtcaactaacgccacaagcagcaactgatcttgcattattgttgcga
gctggttcactagccgcaccgatggaaatcatcgaggaacgtacgcttggcccgagcgtg
ggcctggataacattagaaagggctttaactcggtgcagtatgggtttctcgcaatcacg
gtttttataatctcgtactatatgctgtttggactaatctcggtgattgcgttatcggtg
aacctgtttttacttgtcgcggctctgtcaataattcgggcgacccttacattgcctggt
attgcggcaattgcgctgacattaggaatggcgattgacgcaaacgtccttattaatgag
cgcatccgagaagaactacgtcatggagcatctgctcaactatctatccagaatggcttc
ttgcatgcatgggtaacgattctagattcgagcatcacgatgctgatagctgggctagca
ttacttacgtttggctcgggaccagtgcgcggctttgctgttgtgtactgcataggcata
ctaacatctatgttttctgcggtatttttcgcgcgcgggttggtaaacatctggtatggt
aaaaagaagcgacttaagtcgctagctatcgggcaaatatggagcccgaaagactatacc
tag
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