Vibrio lentus: ISX51_15655
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Entry
ISX51_15655 CDS
T09020
Symbol
rsmF
Name
(GenBank) 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF
KO
K11392
16S rRNA (cytosine1407-C5)-methyltransferase [EC:
2.1.1.178
]
Organism
vle
Vibrio lentus
Brite
KEGG Orthology (KO) [BR:
vle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vle03009
]
ISX51_15655 (rsmF)
Enzymes [BR:
vle01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.178 16S rRNA (cytosine1407-C5)-methyltransferase
ISX51_15655 (rsmF)
Ribosome biogenesis [BR:
vle03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
ISX51_15655 (rsmF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
YebU_pre-PUA_dom
Methyltr_RsmF_N
Methyltranf_PUA
Methyltransf_31
NSUN5_fdxn-like
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
WGS60695
LinkDB
All DBs
Position
ED252-c1:3452617..3454038
Genome browser
AA seq
473 aa
AA seq
DB search
MHANVYIPEEFLTHIEGIMPSHLDMASFVASCQKPLRKSIRVNTLKISVEDFLVRAKDKG
WELEPVPWCETGFWITADESEAPLGNTAEHMSGLFYIQEASSMMPPSALFQGEENYQAVL
DTAAAPGSKTTQIAALMDNRGVLVANEYAASRVKVLHANIERCGVRNAALSNFDGRVFGG
WLPEQFDAVLLDAPCSGEGTIRKDADAMKNWTYQSVVDIADTQKDLIESAFHALKPNGVL
VYSTCTLSTEENQQVCHHLKETFGDAVEFESLENLFDNAKATTTEEGFLHIFPQVYDSEG
FFVARIRKLASVTPPEVKKRLGKFPFEKANKKAQQEVAEQLLDALDIELPSDTQVWIRDK
DVWLFPEALEPMIGEFRFSRMGIKIAETHKKGYRWQHQVATTLATGNEANIVDLNIEDAR
EWFMGRDVRPEGLSGKGEVLVKYNGAIIGLGKWVGNRVKNGLPRELVRDKNLF
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
ttgcacgctaacgtatatatcccagaagaattcctgactcatattgaaggcatcatgcca
agccatctagatatggcttcatttgtcgcttcttgtcaaaagccacttcgtaaaagtatt
cgagtgaacacactgaagatcagtgttgaagatttcctcgtacgcgcgaaagacaaaggt
tgggaactggaaccagtaccttggtgtgaaacgggtttttggattactgcagatgaaagt
gaagcgcctttaggcaatacagcagagcacatgtctggcctattctacattcaagaagcc
agctcgatgatgccaccatccgctctattccaaggcgaagagaattatcaagccgtgtta
gacacagctgcagcacccggctcaaaaacgactcaaatagcggccttgatggataaccgt
ggcgtactggttgctaatgaatacgcagcaagccgtgtgaaagtccttcacgccaacatc
gagcgctgtggcgtgcgtaatgcagccctaagtaactttgatggcagagtcttcggcggc
tggctaccagagcaatttgatgctgtgttgttagacgcaccctgctctggtgaaggtacg
attcgtaaagacgccgatgcaatgaagaactggacttatcagtctgtggtcgatattgct
gacactcaaaaagatctgattgaaagcgcttttcacgcactcaaacctaatggtgtgttg
gtttactcaacctgtacattaagtactgaagagaaccaacaagtatgtcaccatctaaaa
gagacgtttggcgacgcagttgaattcgagtctttagaaaacttattcgacaatgcaaaa
gcgactacgactgaagaaggctttcttcatatcttcccgcaggtttatgactcggaaggt
ttcttcgttgcacgtatccgtaaactcgcttctgtgacaccgccagaagtgaagaaacgt
ttgggtaaattcccatttgaaaaagccaataagaaagcgcagcaagaagtcgctgaacag
cttttagacgcactggatatcgagttaccaagtgacactcaggtatggattcgtgacaaa
gacgtttggctattcccagaagcactagagccgatgattggcgagttccgtttctctcgt
atgggcattaagatcgcagagacccataagaaaggttatcgctggcagcatcaggtagcg
acaacgcttgcaacgggcaacgaagcaaacattgtagatctgaatattgaagacgcacgt
gaatggtttatgggacgagatgttcgcccagaaggcttgtcaggtaaaggcgaagtgctg
gttaaatataacggcgcgatcattggccttggtaagtgggttggcaaccgagtgaagaac
ggtttaccgcgagagctagtacgcgataagaacctgttctaa
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