Vulpes lagopus (Arctic fox): 121477454
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Entry
121477454 CDS
T07435
Symbol
USP13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
vlg
Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vlg01002
]
121477454 (USP13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vlg04121
]
121477454 (USP13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vlg04147
]
121477454 (USP13)
Enzymes [BR:
vlg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121477454 (USP13)
Peptidases and inhibitors [BR:
vlg01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121477454 (USP13)
Ubiquitin system [BR:
vlg04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121477454 (USP13)
Exosome [BR:
vlg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121477454 (USP13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_4
UBA_3
Motif
Other DBs
NCBI-GeneID:
121477454
NCBI-ProteinID:
XP_041587697
LinkDB
All DBs
Position
17:complement(28991657..29110655)
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AA seq
863 aa
AA seq
DB search
MQRRGALFGVPGGSGSRKMAAGDVGELLVPHMPTIRVPRSGDRVYKNECAFSYDSPNSEG
GLYVCMNTFLAFGREHVERHFRKTGQSVYMHLKRHVREKVRGASGGALPKRRNSKIFLDL
DTDDDLNSDDYEYEDEAKLVIFPDHYEIALPNIEELPALVTIACDAVLSSKSPYRKQDPD
TWENELPVSKYANNLTQLDNGVRIPPSGWKCARCDLRENLWLNLTDGSVLCGKWFFDSSG
GNGHALEHYRDMGYPLAVKLGTITPDGADVYSFQEEEPVLDPHLAKHLAHFGIDMLHMHG
TENGLRDNDMKPRVSEWEVIQETGTKLKPMYGPGYTGLKNLGNSCYLSSVMQAIFSIPEF
QRAYVGNLPRIFDYSPLDPTQDFNTQMTKLGHGLLSGQYSKPPVKSELIEQVMKEEHKPQ
QNGISPRMFKAFVSKSHPEFSSNRQQDAQEFFLHLVNLVERNRIGSENPSDVFRFLVEER
IQCCQTRKVRYTERVDYLMQLPVAMEAATNKDELIAYELTRREAEANRRPLPELVRAKIP
FSACLQAFSEPENVDDFWSSALQAKSAGVKTSRFASFPEYLVVQIKKFTFGLDWVPKKFD
VSIDMPDLLDINHLRARGLQPGEEELPDISPPIVIPDDSKDRLMNQLIDPSDIDESSVMQ
LAEMGFPLEACRKAVYFTGNMGAEVAFNWIIVHMEEPDFAEPLTMPGYGGAASAGASVFG
ATGLDNQPPEEIVAIITSMGFHRNQAIQALRATNNNLERALDWIFSHPEFEEDSDFVIEM
ENNANANIISEAKPEGPRVKDGSGMYELFAFISHMGTSTMSGHYVCHIKKEGRWVIYNDH
RVCASERPPKDLGYMYFYHRVPR
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgccggggcgccctgttcggcgtgccgggcggcagcggcagcaggaagatggct
gcaggggacgtcggcgagctgctggtgccgcacatgcccacgatccgcgtgccgcgctcg
ggggacagggtgtacaagaacgagtgcgccttctcctacgactccccgaattctgaaggt
ggactctatgtatgcatgaatacatttttggcctttggaagggaacatgttgaaagacat
tttcgaaaaactggacagagtgtatacatgcacctgaagagacatgtgcgagagaaggta
agaggggcatctggtggagctttaccaaaaaggaggaattccaagatttttttagatcta
gatactgatgacgatttaaatagcgacgattatgaatatgaagacgaagccaaacttgtt
atattcccagaccactatgaaatagcactaccaaatattgaggagttaccagccctggta
acaattgcttgtgatgcggttctcagttcaaaatctccatatagaaagcaggacccagac
acatgggaaaatgaattgccagtatccaaatacgcaaataaccttacccaattggacaac
ggggtcaggattcctccaagtggttggaagtgtgccaggtgtgacctgcgggaaaacctc
tggttgaatctgaccgatggctctgtgctgtgcgggaaatggttctttgacagctctggg
ggcaacggccatgcactggagcattacagagacatgggctaccctctagctgtgaaactg
ggaaccatcactcctgatggggcagatgtttattcttttcaagaagaggaacctgttttg
gatcctcatttggccaagcacttagcgcattttggaattgatatgcttcatatgcatggg
acagagaacgggcttcgggacaatgacatgaagccgcgggtcagcgagtgggaagtgatc
caggagacggggacgaagctgaagcccatgtatggccccggatacacgggtctcaaaaat
ctgggcaacagctgctacctgagttctgtcatgcaggccatcttcagcatcccagagttc
cagagagcgtatgtagggaatcttccaagaatatttgactactctcctttagatccaaca
caggacttcaacacacagatgactaagttaggacatggccttctctcaggccagtattca
aaacctccagtgaaatctgaactcattgaacaggtgatgaaggaggaacataagcctcag
caaaatgggatctctccacgcatgttcaaggcctttgtaagcaagagccaccccgaattc
tcctctaatagacagcaggacgcccaggaatttttcttgcacctggtgaatctagtagag
aggaaccgcattggctctgaaaacccaagtgatgtttttcggtttttggtggaagaacgt
atccagtgctgtcagactcgaaaagtccgctacacggagagagtggattacctgatgcag
ttacctgtggccatggaggcagcaaccaacaaggatgaactgattgcctatgaattgacg
agaagggaagcagaagcaaacagaagaccccttcctgagttggttcgtgccaagataccg
tttagtgcctgccttcaggccttttctgaaccagaaaatgtagatgacttctggagtagt
gccctacaagcaaaatctgcgggtgtgaaaacgtcccgctttgcctcattccctgaatac
ttggtagtgcagataaagaagttcacttttggtcttgactgggttcccaagaaatttgat
gtttctattgatatgccagacctacttgatatcaatcatctccgagccagggggttacag
ccaggagaggaggaacttccggacatcagcccccctatagtcattcctgatgactcgaaa
gatcgtctgatgaaccaactgatagacccctcagatattgatgagtcatcagtgatgcag
ctggctgagatgggtttccctctagaagcatgtcggaaggctgtgtactttactggaaac
atgggagctgaagtggccttcaactggatcattgttcacatggaagagccagattttgcc
gaaccactgaccatgcctggttatggaggagcagcttctgctggagcctctgtttttggt
gctactggattggataatcaacctccggaggaaattgtagctattattacgtccatggga
ttccatcgaaatcaggctattcaggcgctacgagccacgaataataacctggaaagagca
ctggattggatctttagtcaccctgagtttgaggaggacagtgactttgtgatcgagatg
gagaataacgccaatgcaaacattatttctgaggccaagcctgaaggacctagagtcaag
gatggatctggaatgtatgaattatttgcgttcatcagtcacatgggaacatctacaatg
agtggccattacgtttgtcatattaaaaaggaaggaaggtgggtgatctacaatgaccat
agagtgtgtgcctcagaaaggccccccaaggacctgggctacatgtacttttaccacagg
gtgccacgctga
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