Vulpes lagopus (Arctic fox): 121478314
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Entry
121478314 CDS
T07435
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg03250
Viral life cycle - HIV-1
vlg04623
Cytosolic DNA-sensing pathway
vlg05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121478314 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
121478314 (SAMHD1)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
121478314 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vlg03400
]
121478314 (SAMHD1)
DNA repair and recombination proteins [BR:
vlg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
121478314 (SAMHD1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
SAM_1
SAM_2
HD_assoc_2
PDEase_I
Motif
Other DBs
NCBI-GeneID:
121478314
NCBI-ProteinID:
XP_041589200
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All DBs
Position
18:22121591..22176189
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AA seq
628 aa
AA seq
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MQGADSDQPFKRPRCDGSPRTPPNTRSAAAGRSSGPELRPDHQRLRGRETATEAGTAGLR
TGRPGAKHIQENKITGLTLLHLNEADLERLGISTLGDRKKLQACIQQLSEIHVDAMKVIN
DPIHGHIELHPLLIRIIDTPQFQRLRYIKQLGGSYYIFPGASHNRFEHSLGVGYLAGCLV
RALREKQPELQISGRDVLCVQIAGLCHDLGHGPFSHMFDGRFIPLARPNVKWTHEQGSVM
MFEHLVNSNGLKAVMEQYGLIPEEDICFIKEQITGPLETPIKDSLWPYKGRPKDKSFLYE
IVANKRNGIDVDKWDYFARDCHHLGIQNNFDYQRFLKFARVCEVDNRKRICTRDKEVGNL
YDMFHTRNTLHRRAYQHKVGNIIDTMITDAFLKADPYIEITGAEGKKYHISTAIDDMEAF
TKLTDNIFLEILYSSDPNLNEAREILKKIEYRDLYKYVGETKPKGKIRIERENYKSLPEE
IARAKPSDIPLEAELKAEDLIVDVINMDYGMEDKNPIDHVRFYCKSDLSKAVMITKDQVS
EFLPERFAEQLIRVYCKKTDANTLFAVKQHFVHWCLIRDFTKPQDGDVVAPLITPRKAEW
NNMDSAQSPDHFRERSKFKLRLFQDDSM
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgcagggagctgactcggaccagcccttcaagcggccgcgatgcgatggcagcccaaga
accccgccaaacacccgttccgcggcggcggggaggtcctcgggccccgaactccgcccc
gaccaccagaggctgcggggccgggagacggccaccgaggcggggactgcgggcctgagg
acggggcgccccggggcaaaacatattcaagaaaataaaatcacaggtctaactttgctc
caccttaatgaggctgatcttgaaagacttggaataagtaccttgggcgacagaaagaag
ctccaagcttgtatccaacaactgagtgaaattcatgttgatgcaatgaaggtaattaat
gatcctatccatggccacattgaactccaccctctcctcatccgaatcatcgacacacct
caatttcagcggcttcgatatatcaaacagttgggaggcagttactacatttttccaggt
gcttcgcacaatcgatttgagcacagtctaggtgtagggtatctagcaggatgtctggtt
cgtgcactgcgtgagaagcaaccagagctgcagataagtggacgagatgtgctctgtgtt
cagattgctggcctttgtcatgatctcggtcatgggccattttctcatatgtttgatgga
agatttattccacttgctcgcccaaatgtgaaatggacgcatgaacagggctcagtgatg
atgtttgagcacctggttaattctaatggactaaaagcggtcatggaacagtatggtctc
atccctgaagaagatatttgctttatcaaggaacaaattacaggaccacttgaaacacca
atcaaagattctttgtggccttataaaggacgtcccaaagataaaagcttcctttatgag
atagtggccaataaaagaaatggcattgatgtggacaaatgggattattttgccagggac
tgccatcatcttggaatacaaaataattttgattatcagcgctttcttaaatttgctcgt
gtctgtgaagtagataataggaagcgtatttgcactagagataaggaggttgggaatctg
tatgacatgttccatactcgcaacactttgcaccgcagagcttatcaacacaaagttggc
aacatcattgatacaatgattacagatgctttcctcaaagcagacccctacatagagatt
acaggggctgaaggaaagaagtatcacatttctacagcaattgatgacatggaagccttc
actaagctaacagataacatttttctggagattttatattcttctgatcccaacctcaat
gaagcacgagagattttaaaaaaaatcgaataccgtgatctatacaagtatgtgggtgag
actaagccaaagggaaaaataagaattgaaagggaaaactataaaagccttccagaggaa
attgccagggctaaacctagtgacataccactagaagctgaactgaaggctgaagattta
atagtggatgttatcaacatggattatgggatggaagacaagaatccaattgaccatgtt
cgcttctattgtaagagtgacctcagcaaagcagtcatgattactaaagatcaggtttca
gaatttttgccagagagatttgcagagcagctaattcgtgtatactgtaagaagactgat
gcaaacacattgtttgctgtgaaacaacatttcgttcattggtgcttaatcagagacttc
accaagccgcaggatggtgatgtggtggccccacttataacacctcgaaaagcggagtgg
aataacatggattcagcccagagcccagatcacttccgagaaaggtccaaatttaaactc
cggctttttcaggatgactcaatgtga
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