Vulpes lagopus (Arctic fox): 121488928
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Entry
121488928 CDS
T07435
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg03013
Nucleocytoplasmic transport
vlg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121488928 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
121488928 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vlg03019
]
121488928 (THOC1)
03041 Spliceosome [BR:
vlg03041
]
121488928 (THOC1)
Messenger RNA biogenesis [BR:
vlg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
121488928 (THOC1)
Spliceosome [BR:
vlg03041
]
Complex C
Other components
EJC/TREX
121488928 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
121488928 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
HsdM_N
Motif
Other DBs
NCBI-GeneID:
121488928
NCBI-ProteinID:
XP_041607223
LinkDB
All DBs
Position
1:118930139..118985367
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AA seq
657 aa
AA seq
DB search
MSPTPPLFSLPEARTRFTKSTREALNNKNIKPLLNTFSQLPGSENEKKCTLDQAFRGVLE
EEIINHSSCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV
ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDDEAPTTCSIPIDYNLYRKFWS
LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERTSDTKPTRVARKRTAPE
DFLGKGPNKKILMGNEELTRLWNLCPDNMEACKSETREYMPTLEEFFEEAIEQADPENMV
ENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEI
KTGEDEDEEDNDALLKENESPDVRRDKPVTGEQIEVFASKLGEQWKILAPYLEMKDSEIR
QIECDSEDMKMRAKQLLVAWQDQEGVHATPENLMNALNKSGLSDLAESLTNDNETNS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgacgccgccgctcttcagtttgcccgaagcgcggacgcggttcacgaagtct
accagagaggccctgaacaacaaaaatatcaagccattgttgaataccttcagccaatta
cctggcagtgaaaatgaaaaaaaatgtacccttgaccaagctttcagaggtgttctagaa
gaagaaattataaatcattcatcatgtgaaaacgttttagctattatttctcttgctatt
gggggagtaactgaaggtatttgtaccgcatctacaccttttgtattgttgggagatgtt
ttggattgtcttcctctggatcaatgtgacacaatattcacttttgtggaaaaaaatgtt
gctacttggaaatcaaatacattctattctgctgggaaaaattatttactacgtatgtgt
aatgatctcctaagaagattatcaaaatcccagaatacagtcttctgtggacgaattcaa
ctctttttggccaggcttttccctttatctgagaaatcaggtcttaacttgcagagtcag
tttaatctggaaaatgtcactgttttcaataccaatgagcaggaaagcaccttgggtcag
aagcacactgaggatagagaagaaggaatggatgtagaagaaggtgaaatgggagatgat
gaagctccaacaacttgctccattccaattgactacaacctatatcgaaaattctggtca
cttcaggattacttcaggaaccctgtgcaatgctatgagaagatttcatggaaaactttt
cttaagtattctgaagaagttctagctgtttttaaaagttataaattagatgatactcaa
gcctcaaggaaaaaaatggaagaattaaaaacaggaggagaacatgtatattttgcaaaa
tttttaacaagtgaaaagttgatggatttgcaactgagcgacagtaactttcgccgacac
atcctgttgcaatatctcattttattccagtatctcaagggacaggtcaaattcaaaagt
tcaaactatgttttaactgatgagcaatcactctggattgaagatactacaaaatcagtt
tatcaactactatctgaaaacccccccgatggagaaagattttcaaagatggtagagcat
atattaaacactgaagaaaactggaactcatggaaaaatgaaggctgcccaagttttgtg
aaagaaagaacatcagacaccaagccaacaagagtagctcgaaagagaacggcaccagag
gactttctagggaaaggacccaacaaaaagattctgatgggaaatgaggagttaacaagg
ctttggaatctctgtcctgataatatggaagcctgcaaatcagaaacaagggaatacatg
ccgactttggaagaattctttgaagaagccattgaacaggcagaccctgaaaacatggtt
gaaaatgaatacaaagctgtgaacaattcaaattatggttggagagccctgagactatta
gcacgaagaagccctcacttcttccagccaaccaaccagcagtttaaaagtttgccagaa
tatcttgaaaacatggtaataaagctagcaaaggaattaccacctccttctgaagaaata
aaaacaggtgaggatgaagatgaggaagataatgatgctttactgaaggaaaatgaaagc
cctgatgttcggcgagacaaacctgtaacaggggaacagatagaggtgtttgccagtaaa
ctgggtgagcagtggaagatcctggctccctacttggaaatgaaagactcagaaattaga
caaattgagtgtgacagcgaagacatgaagatgagagctaagcagctactagttgcctgg
caagatcaagagggagtacatgcaacacctgagaatctgatgaatgcactaaataagtcc
ggattaagtgaccttgcagaaagtctaactaatgacaatgagacaaatagttag
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