Vulpes lagopus (Arctic fox): 121493403
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Entry
121493403 CDS
T07435
Symbol
PRPF39
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
vlg
Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vlg03041
]
121493403 (PRPF39)
Spliceosome [BR:
vlg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121493403 (PRPF39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_14
Suf
TPR_16
Motif
Other DBs
NCBI-GeneID:
121493403
NCBI-ProteinID:
XP_041615182
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All DBs
Position
6:complement(51122828..51160808)
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AA seq
667 aa
AA seq
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MQNSHMDEYRNSSNGSTGNSSEVVVEQSADFSTEIMNVTEMEQSPDGSPNVNATTEENEI
ANAVDLPVTETETNFPPEYEKFWKTVENNPQDFTGWVYLLQYVEQENHLMAARKAFDKFF
IHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLKETLDPGDP
ETNSTIRGTFEHAVLAAGTDFRSDRLWEMYINWENEQGNLREVTAIYDRILGIPTQLYSH
HFQRFKEHVQNNLPRDLLTGEQFIQLRRELASVNGHSGDDGPPGDDLPSGIEDITDPAKL
ITEIENMRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYLEF
EIENGTHERVVVLFERCVISCALYEEFWIKYAKYMENHSIEGVRHVFSRACTIHLPKKPM
VHMLWAAFEEQQGNINEARNILRTFEECVLGLAMVRLRRVSLERRHGNMEEAEHLLQDAI
KNAKSNNESSFYAIKLARHLFKIQKNLPKSRKVLLEAIERDKENTKLYLNLLEMEYSGDL
KQNEENILNCFDKAIHGSLPIKMRITFSQRKVEFLEDFGSDVNKLLNAYDEHQTLLKEQD
SLKRKAENGSEEPEEKKAHTEDTSSSSTQMIDGDLQANQAAYNYSAWYQYNYQNPWNYGQ
YYPPPPT
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaattctcacatggatgagtacaggaattctagtaatggcagcacaggcaacagt
tcagaggtagtggtagaacaatctgctgatttcagtactgagattatgaatgttacggaa
atggaacagtcccctgatggatcgcctaatgtgaatgcaactacagaagaaaatgaaata
gcaaatgctgtggacctgccagtgacagaaacagaaacaaatttccctccagaatatgaa
aaattctggaaaactgtagagaacaatcctcaggattttacaggctgggtatatttgctt
cagtatgtagaacaggagaatcacttgatggctgccaggaaagcgtttgacaaatttttc
atacactatccgtattgctatggttactggaaaaagtatgcagaccttgaaaagcggcat
gacaacattaaacaatcagatgaggtgtatcggcgggggcttcaggcaatacctcttagt
gttgacctatggatacattatataaacttcttaaaagaaacactggaccctggtgatcct
gagacaaacagtacaataagaggaactttcgagcatgctgttctagctgcaggaacagat
ttccgatctgacagactgtgggaaatgtatataaactgggaaaatgaacagggaaacctg
agagaagttacagctatatatgatcgtattcttggtattccaacacagctgtatagtcac
cattttcagagatttaaagaacatgtacagaataacttgcctagagatcttctaactggc
gaacagtttattcagctgcgaagggaattagcttctgtaaatggacatagtggtgatgat
ggtcctcctggtgatgatctaccatcgggaattgaagacattactgatccagcaaagcta
attacggaaatagaaaacatgagacatagaatcattgaaattcatcaagaaatgtttaat
tataatgagcatgaagttagtaaaaggtggacatttgaagaaggtattaaaagaccttat
tttcacgtgaaaccattggaaaaggcacaactaaaaaactggaaagaatacttagaattt
gaaattgaaaatgggactcatgaacgagttgtggttctctttgaaagatgtgtcatatca
tgtgccctctatgaggagttttggattaagtatgccaagtacatggaaaaccatagcatt
gaaggagtgaggcatgtcttcagcagagcttgcactatccatctcccaaagaaacccatg
gtgcatatgctttgggcagcttttgaggaacagcagggtaatattaatgaagccaggaat
atcttgagaacatttgaagaatgtgttctaggactggcaatggttcgtttgagaagagta
agtttagaacgacggcacggaaatatggaagaagctgaacatttgcttcaggatgccatt
aagaatgccaaatcaaataatgaatcatcattttatgctatcaaactagcccgacatctt
tttaaaatacaaaaaaaccttcccaaatcaagaaaggtgcttttggaagcaatcgaaaga
gacaaagaaaatacaaagttatacctcaatttacttgaaatggaatatagtggtgacctc
aaacaaaatgaagaaaatatcctaaattgttttgacaaagctatacatggttcattacct
attaaaatgagaattacattttctcagagaaaagtggagtttcttgaagattttggttca
gatgttaataagcttctgaatgcttatgatgaacatcagacacttctaaaagaacaggat
tctttaaaaaggaaagcagaaaatggatcagaagaaccagaggaaaagaaagctcataca
gaagatacaagttcatcatctacacagatgattgatggtgatttacaggcaaatcaagct
gcatataattatagtgcctggtatcaatacaattatcagaatccttggaattatggacag
tattaccctccccctccaacctga
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