Vulpes lagopus (Arctic fox): 121493632
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Entry
121493632 CDS
T07435
Symbol
NUP54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg03013
Nucleocytoplasmic transport
vlg05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121493632 (NUP54)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
121493632 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vlg03019
]
121493632 (NUP54)
Messenger RNA biogenesis [BR:
vlg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121493632 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
121493632
NCBI-ProteinID:
XP_041615598
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All DBs
Position
6:complement(76370503..76400066)
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AA seq
508 aa
AA seq
DB search
MAFNFGAPSGTSGTAAAPAAPAGGFGGFGTTSTTAGSAFSFSAPANTGATGLFGGTQNKG
FGFGTGFGTTTGSSTGLGTGLGTGLGFGGFNTQQQQQQTTLGGLFSQPTQAPTQSNQLIN
TASALSAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIPPVEFTQENPFCRFKAVGYS
CMPNNKDEDGLLVLVFNKKETDIRSQQPQLVESLHKVLGGNQTLTVNVEGIKTLPDDQTE
VVIYVVERSPNGTSRRVPATTLYAHFEQTNIKTQLQQLGITLSMTRTELSPAQIKQLLQN
PPAGVDPIIWEQAKVDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDIS
ELQKNQTTTMAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQC
ELNAPTQFKGRLNELMSQIRMQNHFGAVKSEERYYIDADLLREIKQHLKQQQEGLSHLIS
IIKDDLEDIKLVEHGLNETIHMRGGVFS
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggccttcaacttcggggctccctcgggcacctctggcaccgccgcggcccccgcggcc
cccgcgggtgggtttggaggatttgggacaacatctacaacagcaggttctgctttcagc
ttttctgctccagctaacacaggtgctactggactctttggtggtactcagaacaaaggt
tttggatttggtactggttttggcacaacaactggaagtagtactggtttaggtactggt
ttgggaacaggactgggatttggaggatttaatacacagcagcagcagcagcaaactaca
ttaggtggtctcttcagtcagcccacacaagctcctacccagtccaatcaactgataaat
actgcaagtgctctttctgctccaacgctgttgggagatgagagagatgctattttagca
aaatggaatcagctgcaggccttttggggaacaggaaaaggatatttcaacaataacatt
ccaccagtggaattcacacaagaaaatcccttttgccgatttaaggcagtaggatatagt
tgtatgcccaataataaagatgaagatgggctactggttttagttttcaacaaaaaagaa
acagatattcgaagccagcaaccgcagttggtagaatcattgcataaagttttgggagga
aaccagacacttactgtaaatgtagagggtattaaaacattgccagatgatcagacagaa
gttgtcatttacgttgttgaacgctctccaaatggtacttcaagaagagttccagctaca
acactatatgcccattttgaacaaactaatataaaaacacagttgcagcaacttggtata
accctttctatgactagaactgaactttctcctgcacaaatcaaacaacttttacagaac
cctcctgctggtgttgatcccattatctgggaacaagccaaggtggataaccctgattct
gaaaagttaattcctgtacccatggtgggtttcaaagaacttcttcgaagactgaaggtt
caagatcagatgactaagcagcatcagaccagattagatatcatatctgaagatattagt
gaattacagaagaatcaaactacaactatggccaaaattgcacaatataagaggaaactc
atggatctttcccatagaaccttacaggtcctaatcaaacaggaaattcaaaggaaaagt
gggtatgccatccaagctgatgaagagcaattgcgagttcagctagatacaattcagtgt
gagctgaatgcacctacccagtttaagggccgactaaatgaactgatgtcccaaatcagg
atgcagaatcattttggagcggtcaaatcggaggaaagatattacatagatgcagatctg
ttacgagaaatcaagcagcatttgaaacaacaacaggaaggccttagccacttgattagt
atcataaaagatgacctagaagatataaagttggtagaacatggattgaatgaaaccatc
cacatgagaggtggtgtctttagttga
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