Vulpes lagopus (Arctic fox): 121494830
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Entry
121494830 CDS
T07435
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1 isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121494830 (FREM1)
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Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Lectin_C
Calx-beta
1-cysPrx_C
Motif
Other DBs
NCBI-GeneID:
121494830
NCBI-ProteinID:
XP_041617737
LinkDB
All DBs
Position
7:97350198..97519093
Genome browser
AA seq
2183 aa
AA seq
DB search
MSSPNWSGHSALLLLLLLLLLNWASPSFISLNRGVRVMKGSSAFLSGDDLKFAIPKEKDA
CKVEVVMNEPMTQRVGKLTPEVFDCHFLPNEVKYIHNGCPILDEDTVKLRLYRFTETDTF
TETFILRVYLLEPDCNIIRKSNNVLEVLEFYGLSGAIDKNLLRFDYERTAGLECTVRLDP
VGSRLPAHGQVVLLEPRPEKPRGDQPHSFFPKSQLGTELRCPGGSCALGLKKMGSVNVSC
EEFLLMGLHYQHTDPPSPNIDYISIQVDLTDGRSKIVYKSESAWLPVYIRPGIPNQIPRA
AFMAMFTLEVDQFILTSLTTSVLDCEEDETPKSLLVFNITKAPLQGYVTHLWDHTRPVSS
FTWKDLSDLQIAYQPPNSSHSVRRHYEVEVEVYDFFFERSAPITVHISIRTADTNAPRVS
WNTGLSLLEGQSRAITWEQFQIVDNDDIHAVQLVTVGGLQHGRLTLRGGKGFLFTVADLQ
AGVVRYHHDDSDSTKDFVIFRIFDGHHSIRHKFPINILPKDDSPPFLISNVVIELEEGQT
ILIQSSMLRASDMDSSDDYIYFNITKPPQAGEIMKKPGPGLIGYPVPGFLQRDLFNGIIY
YRHFGGEVFEDSFEFVLWDSHEPPNFSVPQVVTIHITPVDDQLPKEAPGVSRHLVVKETE
VAYITKKHLHFIDTEYNRELLYTITTPPFFSFGHRHLDAGKLIMVDSISKLTKNSAARGL
RSFTQHAVNHMKVAYKPPMQDMGLNPGYVQFAFSISNQHGGTLHGICFNITILPVDNQVP
KVFTNSLRVAEGAQCVISTENVLISDVDTKLDSIYLSLQRLPQCGRVELDGFPLNTGDIF
SWGDLHALKVRYQHDGSEILQDDIFLEVTDGTNSAEFILHIEVLPVNDELPILKTDLIPM
MHCSEGEEVVITSEYIFATDVDSDDLKLMFVIAQKPQHGVVRKAGVTVDQFSQGDVISGA
VTYKHTGGEIGLVPCFDTITLVVSDEEAGPFVNGCCYNGPHPSIPLHESFPVYDLNITVH
PVDNQSPSIAIGTMFVVDEGFSAAVTINHLSATDPDTATDDLEFVLVSPPQFGYLENTLP
SAGFEKSNMGISIASFLWRDMKALHINYVQARHLRMEPTADQFMVYVTDGKQRSLEIPFY
IIINPMNDEAPDFVVQNITVCEGQMKELESSTIDAADLDVPKDPLLFSITHKPRHGLLIN
RVLSKDFPQNKQSVNPGQKHELVQNFSLELLKNGMKLMYVHDDSETLADDFTIQLSDGKH
KILKTISVEITPVNDEKPMLSKKAEITMKMGETRIISSAVLSAIDKDSPREKIYYLFERL
PQNGQLQLKTGRDWVPLYPGMKCTQEEVDLNLLRYTHTGAMDSQDQDSFTFYLWDGDNRS
PAFDCHITIKDMGKGDIVILVKPLVVSKGDRGFLTTTTLLAVDGTDKPEELLYVITSPPR
YGQVQYVRYPGVPITSFSQMDIAGQTVCYVHKSKAAVSRDTFRFIVSNGLQTKHGVFEII
LETMDRALPVVTRNRGLRLDEGTTGLLSPDILQLTDPDTPAENLTFMLAQLPQHGQLYLR
GTVLLQHNFTQQDVDSRNVAYRHLGGDSQVDCFTFVATDRTNQGFVVDGRVGQEPVSFTI
QVDQLDKTAPHITHLHSPSQVVLLKNGCYGIYLTSHVLKASDPDTNDDLIIFKILRGPQH
GHLENTTTGEFIHEKFVQKDLNSKTILYIINPSLEVNSDIMEFQIMDPTGNSATPQILEL
KWSHIEWSQTEFEVCESVGMLPLEITRRGYSMDSAFVSVKVNQVSATVGKDFTLTPSKLI
QFDPGMSTKMWNIAITYDGLEEDDEAFEVILNSPVNAVLGTKTKAAVKILDSKGGQCHPS
YSFNPNKHNAREKGIWHPLSPGSSSSTTSGSFHLERRPLPSSKRPAVTRGDTGQGFDSAD
PSRMKLRTQGNGKTVLPSSVYRNGTDIIYHYHGMVSQKLEGDSSPSRKRKAKVAITSQPQ
KTSQVAVLPQADKMESTSDSHFSRQDRLPSIPKDCTPELKGLLHFHESLRKLYKCDGITW
KAWSPQTEEVEGEACPAGWHHHSGYCHSLVTEQKGTWSTAARACKEHHRGSLVTVLSRQH
MRWLWDISGRRPFWIGLNDQVHAGHWEWIGGEPVTFTNWRKGPPQHLKRGKDCVLAQRQG
KWQAQDCRKGKPHNYVCSRKLQM
NT seq
6552 nt
NT seq
+upstream
nt +downstream
nt
atgagctctccgaattggagtgggcacagtgccttgctgttgttgctgctgctgcttctc
ctaaactgggccagtccctccttcatcagccttaaccgtggggtcagggtgatgaagggc
agctctgccttcctgtcgggagatgacctgaagtttgccatccccaaagaaaaagatgct
tgcaaagtggaagttgtgatgaacgagccaatgacccaaagggttgggaaactcactcca
gaggtctttgactgccatttccttcccaatgaagtaaagtatattcacaatggttgcccg
attcttgatgaagatacagtgaagcttagactttacagatttactgagacagataccttc
acggaaacctttatcctgcgggtctatctcctggaaccagactgtaacatcatccgtaag
agtaacaatgtactggaggtgttagaattctacggcctgtccggagccattgataagaac
ctgctcagatttgattacgagaggacggctggcctggagtgtaccgtcaggctggatcct
gtggggagccggctgccagcccacggtcaggtggtcctgctggagcctcggccagagaaa
cctcggggagatcagccacacagttttttccccaagtctcaactgggaacagagctgagg
tgtccaggtggaagctgtgccctgggactgaagaaaatgggaagtgtcaacgtgagctgt
gaggagttcctgttgatggggcttcattatcaacacacagatcccccttctcccaacatc
gactacatctccatccaggtggacctcacagatggcaggagcaaaatcgtatacaagtca
gagagcgcgtggttgcccgtctatatcagacctggcattcctaatcagattccaagggct
gcgttcatggccatgtttactctggaagtggatcagttcatcctgacctctttgactaca
tccgttctggattgtgaagaggacgagaccccgaagtccttgctggtgtttaacattact
aaagcgccactccagggctacgtgactcatctctgggatcacaccagaccagtctcctca
ttcacctggaaagatctcagtgacctgcagatagcctatcagccaccgaatagcagccat
tctgtgaggagacattacgaggtggaggtggaggtttatgacttcttctttgaaaggagt
gcgcctattacggtccacatctccatcagaacagcagatacaaatgccccgagagtgtcc
tggaacacaggtctgagtcttctagaggggcaatctcgggccatcacttgggaacagttt
cagattgtcgacaatgatgacatccatgctgtccagctggtcacggtgggcggcctgcag
catggacgacttacactaagaggcggcaaaggatttctcttcactgtggctgaccttcag
gctggagttgttcgctatcatcatgatgatagtgactccaccaaagattttgtgatcttc
aggatattcgatggccatcacagcatccgccataagtttcccatcaacattttgcccaaa
gatgacagtcccccatttctcataagcaatgttgtgattgaactggaggaagggcagacc
atactgatccagagttctatgctgagagcatcagacatggactccagtgatgactacatc
tactttaatatcacgaaacctcctcaggctggagagatcatgaagaagccagggccagga
ctgataggctatcctgtccctggcttccttcagagggatctatttaatggcatcatttac
tatcgtcactttggtggagaggtctttgaagactcttttgaatttgtcctgtgggacagc
catgaacctccaaatttctcagtgccacaggtggtgaccatccatatcactccagtggat
gaccaacttccaaaggaggctcctggagtttctcggcatttggttgtcaaggaaactgag
gtggcctacataactaagaaacatctacattttatagatacagaatataacagggagctt
ctctacacgataacgacacctccgtttttctctttcggccacagacatctggatgctggg
aaattaattatggtggatagcatttcaaagctaactaaaaattctgcagcccgagggctg
agatcattcactcagcatgctgtaaaccacatgaaagtggcctacaagccacccatgcaa
gatatgggcctcaatccaggatatgttcagtttgcattttccatcagtaaccagcatgga
ggcactttgcatgggatctgctttaacatcacaattcttccagtggacaatcaagttcct
aaggtgtttaccaactccctaagagtggctgagggagctcaatgtgtcatcagcacagaa
aatgttctgatttctgatgtggataccaaactggacagcatctacctctccctacaaaga
ctgcctcagtgtggaagagtggagctggatggatttcctctaaacacaggagacatattt
tcttggggagacctccatgccttaaaagttaggtatcagcatgatggatctgagatactt
caggatgacatattcttggaggtcacagatggcacgaattcagcagaatttattctacac
attgaggtattgcctgtaaatgatgagctaccaatcctaaagactgacctcattcccatg
atgcattgctcagagggcgaagaggtagtcatcacctctgaatacatttttgctactgat
gtggacagtgatgacttgaaactgatgtttgtgattgctcaaaagcctcaacatggggtg
gtgaggaaggctggagtcacagtggatcagttctctcagggagatgtcatctcgggggct
gtgacatacaaacacacgggtggtgagattggtctggtgccttgttttgataccattaca
ttggtggtttcggatgaagaagctggcccttttgtgaatggctgttgctacaatgggcct
catccatctattcctcttcatgagtcctttccagtgtatgacctcaacatcacagtacat
ccagtggacaaccagtcaccttcaatcgcaataggtaccatgtttgtggtagatgagggt
ttctccgcagccgttaccattaaccatttgtccgccactgaccctgacactgcaacagat
gacttggaatttgttttggtttctcctccccagtttggctaccttgaaaacacacttcct
tctgcaggttttgaaaaaagcaatatgggcataagcatagcttcgttcctgtggagagac
atgaaggctttgcacattaactatgtgcaggctaggcatctaaggatggaaccgacggct
gaccagttcatggtgtatgtcacagatgggaagcaacgctccttggagataccattttac
attataatcaaccccatgaatgatgaagctcctgactttgtagtgcagaatattactgtg
tgtgagggtcagatgaaagaactggaatcctccaccatcgatgcagctgatctggatgtt
cccaaagaccccttgctgttcagcatcactcataaaccacgacatggcctcctcatcaac
agggtgcttagcaaagactttcctcaaaataagcagtctgtcaaccctggccagaagcac
gaacttgttcagaacttttccttggaacttctcaagaatggaatgaagttgatgtatgtg
catgatgactcagagactcttgctgatgactttacaatccagttgtcagatgggaaacat
aagatattaaaaaccatttcagtagagatcaccccagttaatgatgagaaaccaatgctg
agcaagaaggctgaaattacaatgaaaatgggtgaaactcgaattatttctagtgctgtt
ctttcagccatagataaagactcacccagggagaagatttactatttatttgaaaggctt
ccacaaaatgggcaacttcaacttaagacagggagggactgggtccctctctaccctggc
atgaagtgcactcaggaagaagtggatttgaacttgctgagatacacacacaccggggca
atggattcccaggaccaagacagctttaccttctacctctgggatggtgacaacagatca
ccggcatttgactgtcacatcaccatcaaggatatgggaaaaggtgatattgtcatcctt
gtgaaaccgctggtggtgtctaaaggtgatcgaggtttcttgacgaccaccactctcctt
gctgtggatggaacagacaaacccgaggaactactctatgtcatcacctcccctccgcgg
tatggccaggtccagtatgtccgctatcctggagttcccattacaagcttcagccaaatg
gacatagcaggacagacagtctgctatgtacataagagtaaggcagctgtctcccgtgac
accttcagattcattgtcagcaatggcctgcagaccaaacatggggtgtttgagatcata
ctggagaccatggacagagccttacccgtggtgaccaggaacagggggctgagactggac
gaagggaccacgggcctgctctcccctgacatcctccagctgaccgaccctgacacccca
gcggagaacctcaccttcatgttggcccagctcccacaacacggccagctttacctgcgg
gggacagtgctgcttcaacacaacttcacccagcaggacgtggacagcagaaatgtggcc
tataggcacttgggaggagactcccaggtggactgctttacgtttgtggccaccgatagg
acgaaccaaggcttcgttgtggatgggagagtgggacaagaacctgtatcgttcaccatc
caggttgaccagttggacaaaacagccccccacatcacacatttgcattccccttctcaa
gtggtgctcctgaaaaatggctgttacgggatttacctcacttcccatgtgctgaaggca
tcggaccctgacaccaatgatgatctgatcatctttaagattttacgaggcccccaacat
ggacatctggagaacacaaccacaggtgaatttatccatgagaaatttgtccaaaaggac
ttaaacagtaagaccattctttacatcataaacccatctttggaagtgaattcagatatc
atggaattccaaatcatggaccccacagggaactctgctactcctcaaattttggaactg
aaatggtctcatattgagtggtcacagacggaatttgaggtctgcgagagtgtgggcatg
ttgcccttggaaattaccagaaggggatattccatggactcagccttcgtgagtgtaaag
gtcaaccaggtgtcagctacagttggaaaagacttcactctgactccatctaaactgatt
cagtttgacccaggaatgtcaactaagatgtggaatatagcaattacctatgacggatta
gaggaagacgatgaggcctttgaagtaattctgaactcccctgtgaatgcagttcttggc
accaagacaaaagctgcagtgaaaattttggactcaaaaggaggacagtgtcatccttca
tattccttcaacccaaacaagcacaatgcaagggagaagggcatttggcacccgctgtcc
ccagggtcttcctcatccaccacttctggttcctttcatctggaaagaagaccccttcca
tcttccaagcggccagcagtcactaggggagacaccgggcagggctttgattcagcagat
ccgtctcgtatgaagcttaggacccaagggaatggcaaaacagttcttccatcctctgtt
tatagaaatggaaccgacatcatctatcattatcatggaatggtttcccagaagctggag
ggagacagttctccgtctcgcaaaaggaaggccaaagtagccatcaccagtcagccacaa
aagacaagccaagtggcagtgctgcctcaagcagataagatggaatccacaagtgactca
cacttctccagacaggaccgattgccctcaattccaaaggactgcacaccggaattaaag
ggacttctccacttccacgaaagcctccggaagctgtacaagtgtgatggaattacctgg
aaagcctggagcccccaaaccgaggaggtggaaggtgaagcctgcccagctgggtggcac
catcattcaggctactgccactctttggtcacagagcagaagggcacctggagcactgct
gcccgagcttgcaaggaacatcaccgaggcagccttgtaactgttctctccaggcagcac
atgcgatggctttgggacatcagtggaagaaggcccttctggataggtttgaatgaccaa
gtgcatgctggccactgggagtggatcggcggggaacctgtcaccttcaccaactggagg
aaagggccccctcaacatttaaagcgtggcaaggactgtgttttggctcaaagacaaggg
aaatggcaagcgcaggactgtaggaagggcaaacctcacaattacgtgtgctccaggaaa
ctccagatgtaa
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integrated database retrieval system
