Vagococcus lutrae: M2919_05340
Help
Entry
M2919_05340 CDS
T08219
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
vlu
Vagococcus lutrae
Pathway
vlu03030
DNA replication
vlu03430
Mismatch repair
vlu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vlu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M2919_05340 (holB)
03430 Mismatch repair
M2919_05340 (holB)
03440 Homologous recombination
M2919_05340 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vlu03032
]
M2919_05340 (holB)
03400 DNA repair and recombination proteins [BR:
vlu03400
]
M2919_05340 (holB)
Enzymes [BR:
vlu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M2919_05340 (holB)
DNA replication proteins [BR:
vlu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
M2919_05340 (holB)
DNA repair and recombination proteins [BR:
vlu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
M2919_05340 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
nSTAND3
Sigma54_activ_2
ORC5_C
Sigma54_activat
Motif
Other DBs
NCBI-ProteinID:
UQF10936
LinkDB
All DBs
Position
complement(1121115..1122044)
Genome browser
AA seq
309 aa
AA seq
DB search
MKTIQERQPVVYQTLFNALKHHALSHAYLFVGESGTGKQPTANWLASSFLCQDSTTPVAC
GNCSSCKRIHDQQHPDVHHLLPEGQSIKVNQMLAIKSHLGKSGMESAKQVLIVHQTERLT
TAAANSLLKFIEEPEGELLVVFLTSNRQSVLPTIQSRCQVVYFQQIPSDELMSQFMSEGM
LKKHAVLLAEIVNSTEQGLALYQEEWFEETVTIMEKWADYLSKRDPYAFVYVQQKIVPVF
KDKTQQSWLFTCLTAHIKQTFLTQISTLSQEEEYFFVKLQNSALDATKKWQANVSFQNVC
EQLAAKITK
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgatacaagaacgccagccggtagtttatcaaacgttatttaatgcattaaaa
catcacgctttgagtcatgcgtacttatttgtaggcgaatcgggaacaggcaagcagccg
acagctaattggttagctagtagctttttgtgtcaagatagtacgacacccgttgcttgt
ggaaactgttcaagttgtaaacgaatccatgaccaacaacacccagatgttcatcattta
ctacctgaaggacaatctatcaaggtgaatcagatgctggcgataaaatcacatcttgga
aaaagtgggatggaatcagctaaacaagtgttaattgtgcatcaaacagagcgactcaca
acggctgcagcgaacagcttgcttaaatttattgaggaaccagaaggcgaattattagtt
gtttttttaacatccaatcgccaaagtgtgcttcctaccattcaatcacgctgtcaagtg
gtttatttccagcaaatcccctcagatgaattaatgtcacaatttatgtcggaagggatg
ttgaaaaagcacgcagtcttgcttgcagaaattgtgaacagtacagagcaaggattagct
ttgtatcaagaagaatggttcgaagaaacagtgacaattatggaaaagtgggcggattat
ttatcaaaacgcgatccatacgcgtttgtttacgttcagcaaaaaatcgtgcctgttttt
aaagataagacacagcagtcttggcttttcacatgcttaacagcacatataaaacaaacg
tttttaacacaaatttccacacttagtcaagaagaagaatacttttttgtaaagcttcaa
aacagtgcattagacgcgacaaaaaagtggcaagccaatgttagctttcaaaatgtgtgt
gagcaattagcagccaagattacgaagtaa
DBGET
integrated database retrieval system
