Vitreoscilla massiliensis: LVJ82_06270
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Entry
LVJ82_06270 CDS
T08422
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
vms
Vitreoscilla massiliensis
Pathway
vms00521
Streptomycin biosynthesis
vms00523
Polyketide sugar unit biosynthesis
vms00541
O-Antigen nucleotide sugar biosynthesis
vms01100
Metabolic pathways
vms01110
Biosynthesis of secondary metabolites
vms01250
Biosynthesis of nucleotide sugars
Module
vms_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
vms00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
LVJ82_06270 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LVJ82_06270 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LVJ82_06270 (rfbC)
Enzymes [BR:
vms01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LVJ82_06270 (rfbC)
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GFIT
Motif
Pfam:
dTDP_sugar_isom
FdtA
Motif
Other DBs
NCBI-ProteinID:
UOO90577
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All DBs
Position
1191463..1192017
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AA seq
184 aa
AA seq
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MQIRETFFESVHLLDVPRYPDERGWFSESQHQQQYADLLGLDAPVFLQSNVSHSHINVLR
GMHAQLTRPQGKLIQVLSGEIYDVFVDLRADQATFGLWHGIRLSAQNSQQLWIPAGFAHG
FLTLAQDTTVLYHCSDYYVPNDQITLLWNDPDINIQWPNSHTSPVLSPKDQAGMTLKEYI
KCAS
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatccgtgagactttttttgaaagcgtgcacttgctcgatgtgccccgctatccc
gatgagcgcggctggtttagcgagtcgcaacaccaacagcaatatgccgatttacttggc
ttagatgcgccggtgtttttgcaaagcaatgtttctcattcacatatcaatgtgttgcgc
ggcatgcatgcccaattgacccgcccacaaggcaagttaatccaagtattgagcggcgag
atttacgatgtgtttgtggacttgcgtgctgaccaagccaccttcggactatggcacggc
atcagactttccgctcaaaacagccagcaactgtggattcctgctggttttgcgcatggg
tttctaacactagcgcaagacaccacagtgttgtaccattgcagcgattactatgttccc
aacgatcaaatcacattgttgtggaatgaccccgatatcaatattcagtggcccaacagc
cacactagtcctgtgttatcacccaaagatcaggctggaatgacattgaaggaatacata
aaatgcgcgtcttaa
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