Vibrio nigripulchritudo: VIBNI_A2563
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Entry
VIBNI_A2563 CDS
T02871
Symbol
sucA
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
vni
Vibrio nigripulchritudo
Pathway
vni00020
Citrate cycle (TCA cycle)
vni00785
Lipoic acid metabolism
vni01100
Metabolic pathways
vni01110
Biosynthesis of secondary metabolites
vni01120
Microbial metabolism in diverse environments
vni01200
Carbon metabolism
vni01210
2-Oxocarboxylic acid metabolism
Module
vni_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vni_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
VIBNI_A2563 (sucA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
VIBNI_A2563 (sucA)
Enzymes [BR:
vni01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
VIBNI_A2563 (sucA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
CCO58621
UniProt:
U4K7P2
LinkDB
All DBs
Position
1:complement(2731390..2734197)
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AA seq
935 aa
AA seq
DB search
MHNGVMKAWLESSHLAGANATYVEELYELYLSDPDLVSEEWKRVFEGLPKQSDAAEQPHS
RVRDYFRRLAKETKHYNVQVSDPDVDAKQVKVLQLINAYRFRGHEAANLDPLGLWKRDTV
AELNPDFHTLTEDDFDETFNVGSFAIGQETMVLRDLHKALQQTYCGSIGAEYMHMTNTEQ
KRWIQQRLESVSGQASFSSEEKQTFLHELTAAEGLERYLGAKFPGAKRFSLEGGDAMIPM
TKEIIRAAGSQGIREVVIGMAHRGRLNMLVNVLGKKPQDLFDEFAGKHDETWGTGDVKYH
QGFSADFATPGGDVHLALAFNPSHLEIVNPVVIGSVRARQDRLGDKDGSSVLPITIHGDS
AIAGQGVVQETFNMSQARGFCVGGTVRIVVNNQVGFTTSNPRDTRSTMYCTDIAKMVQAP
IFHVNADDPEAVAFVSRLAVDYRNTFKRDVVIDLVCYRRHGHNEADEPNATQPLMYQKIK
KHPTPRKLYADVLIERGELDIETATLQINEYRDALDHGEVVVKEWRPMALHSVDWSPYIG
HDWDTDWDSTFDIKRLTELGQRLCQFPESHKLHSRVNKLYNDRTSMINGEKALDWGMAET
LAYATLVDDGKRIRISGQDSGRGTFFHRHSVLHNQNDASTYVPLANIHDKQGPFQVFDSV
LSEEAVLAFEYGYATAEPGGLTLWEAQFGDFANGAQVVIDQFISSGEQKWARLCGLTMLL
PHGYEGQGPEHSSARLERYLQLCAEQNMQVVVPSTPAQVYHMIRRQVVRPMRRPLVVMSP
KSLLRHPLCTSTLEELAEGTFQAAIGEIDKLNPTRVKRVVFCSGKVYYDLLEQRRNNEQD
DVAIVRIEQLYPFPLEEVQAAISQYKYVEDFVWCQEEPQNQGAWYSSQHNFRAAIPAGAD
LKYAGRPASASPAVGYMSVHMKQQKALVNDALTLD
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgcacaacggcgtgatgaaggcatggctcgagtcttcacacttggctggcgccaatgca
acttatgtagaagaactctacgaactgtatcttagtgaccccgacctggtaagtgaggag
tggaaacgagtttttgaaggattgcccaagcaatctgacgcggcagaacaaccgcattct
cgtgtccgtgattacttccgtcgattagcgaaagagacaaagcattacaatgtccaagtt
agtgatcctgatgtcgatgctaaacaagtaaaagtactacagcttatcaatgcttaccgc
ttccgcggtcatgaagctgccaacctcgaccccctaggtctttggaaacgagatacagtc
gctgaactgaatcctgatttccatactcttaccgaagatgattttgatgaaactttcaac
gtaggttcttttgccattgggcaagaaaccatggttctgagagatcttcacaaagcccta
caacaaacttactgcggttctatcggtgctgaatacatgcacatgaccaatacagagcaa
aaacgttggatccaacaacgtctggaatctgtatccggtcaagcgagtttcagttcagaa
gaaaagcaaacattcctacatgaactgactgctgctgaaggtcttgagcgttatctgggg
gcgaaattccctggtgcgaagcgtttctcccttgaaggcggtgacgccatgattccgatg
acgaaagaaattattcgtgcagcgggctctcaaggtatccgagaagtggtaatcggaatg
gcccaccgtggtcgtctgaacatgttggttaacgttctaggtaagaaacctcaagatttg
ttcgacgagtttgctggcaaacacgatgaaacttggggtactggtgacgttaagtatcac
caaggtttctcagctgatttcgcaactccaggcggtgatgttcaccttgcgctggcgttc
aacccatctcaccttgaaattgttaaccctgtggttattggttctgtacgtgctcgtcag
gatcgtctgggcgacaaagacggcagtagcgttctgcctatcaccattcatggtgactca
gcgatcgctgggcaaggtgtggtgcaggagacatttaacatgtctcaggctcgtggtttc
tgtgtgggcggtacggtacgtatcgttgtgaacaaccaggttggtttcacaacgtctaac
ccacgcgatacgcgatccacaatgtactgtacagacatcgcgaagatggtacaggcacca
attttccacgtgaatgctgatgacccagaagcagttgctttcgtgtctcgtcttgcagtg
gattaccgcaacacgttcaaacgtgatgttgtgattgatctggtttgttatcgccgtcat
ggtcacaacgaagcagatgaaccgaatgcaactcagcctctgatgtatcagaaaatcaaa
aagcaccctacaccgcgtaagctttacgctgatgtgctgattgagcgtggcgagttagac
attgaaacggcaacacttcaaattaacgaataccgtgatgcacttgaccacggtgaagtc
gtggtgaaagagtggcgtccgatggcgttgcattctgtggactggtctccgtatatcggt
cacgactgggatacagattgggactctacgtttgatatcaagcgtcttacagagctgggg
cagcgtttgtgccagttcccggaaagccacaagctgcatagccgtgttaacaagctctac
aacgaccgtacttccatgatcaatggcgagaaagccttggactggggtatggcggaaacc
ttggcgtacgcaaccttggtagatgatggtaagcgcattcgtatctccggtcaggattca
ggtcgtggtacgttcttccatcgtcattctgtgttgcacaaccagaacgatgccagcact
tatgtgcctcttgcgaacattcacgataagcaaggtcctttccaggtattcgactcagta
ttgtctgaagaagcggttcttgcctttgaatatggctacgcaacagcagaaccaggcggt
ttgactctttgggaagcgcagttcggtgatttcgcgaacggtgctcaggttgtaatcgac
cagttcatctcttctggtgagcagaaatgggcgcgtctatgtggtctgactatgcttctg
ccacatggttatgaaggacagggacctgaacactcctctgcacgtctagagcgttacctt
cagttgtgtgctgaacaaaatatgcaggttgttgttccatctacacccgcacaggtttac
cacatgattcgccgtcaggttgtgcgtccgatgcgtcgtccattggtggttatgtcacct
aagtcgcttctgcgtcatcctctgtgtacttctacgctcgaagagctggcagaaggcaca
ttccaggctgcaatcggtgaaattgacaaactgaatccgacaagagtgaaacgtgtcgta
ttctgttcgggcaaggtttactacgatttgctggaacaacgccgtaacaatgagcaagac
gatgttgcaatcgttcgtattgaacagctttacccattccctctggaagaagtacaagct
gcgatttctcaatacaagtacgttgaagacttcgtgtggtgtcaggaagagccccaaaac
cagggtgcctggtattcaagccagcacaacttccgtgccgcgattccggcaggagccgat
ctgaaatatgcaggtcgtccggcgtcggcatcaccggcagtaggctatatgtccgtacac
atgaaacaacaaaaagcgttggtgaacgacgcacttaccctagattaa
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