Vibrio nigripulchritudo: VIBNI_A3643
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Entry
VIBNI_A3643 CDS
T02871
Symbol
rfbC
Name
(GenBank) dTDP-4-deoxyrhamnose-3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
vni
Vibrio nigripulchritudo
Pathway
vni00521
Streptomycin biosynthesis
vni00523
Polyketide sugar unit biosynthesis
vni00541
O-Antigen nucleotide sugar biosynthesis
vni01100
Metabolic pathways
vni01110
Biosynthesis of secondary metabolites
vni01250
Biosynthesis of nucleotide sugars
Module
vni_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
VIBNI_A3643 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
VIBNI_A3643 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
VIBNI_A3643 (rfbC)
Enzymes [BR:
vni01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
VIBNI_A3643 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
CCO59615
UniProt:
U4KA47
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Position
1:complement(3844916..3845476)
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AA seq
186 aa
AA seq
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MKVIDTTIPDVKIIEPAVFGDERGFFMETWQQKKFEELVTGKPTQFVQDNHSKSKKGILR
GLHYQTENTQGKLVRVVSGEVYDVAVDIRDGSETFGQWVGVYLSAENKRQLWIPEGFAHG
FYVTSEEAEFVYKCTDYYNPEAEISLAWNDADLEVDWPIATNPPSLSGKDLAALSFHQII
ESNLCL
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtaattgatactacaattcctgatgtaaaaatcattgagcctgctgtgtttggt
gatgaaagaggtttcttcatggaaacctggcaacagaagaaatttgaagaattggtaaca
ggtaaaccaacccagtttgtgcaagataatcattctaagtctaaaaagggcatattgcgc
ggtctacactaccagactgagaatacgcaaggaaaacttgttcgtgtggtttctggtgaa
gtatacgacgtagccgtggatattcgtgacggttcagaaacctttggtcaatgggttggt
gtttatctatctgctgaaaacaagcgccagctatggataccagaaggttttgcccatggg
ttttatgtgacaagtgaagaagcggaatttgtgtataagtgcacggattattataaccct
gaagcggaaatatcgttggcttggaatgatgcagatttagaggtggattggccgatagct
accaaccctccatctttgtccggaaaagacttggctgctttgagtttccaccagataata
gagtcaaatttatgtctgtag
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