Vibrio neocaledonicus: D3H41_05495
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Entry
D3H41_05495 CDS
T06228
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
vnl
Vibrio neocaledonicus
Pathway
vnl01501
beta-Lactam resistance
vnl01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
D3H41_05495
01503 Cationic antimicrobial peptide (CAMP) resistance
D3H41_05495
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vnl02000
]
D3H41_05495
01504 Antimicrobial resistance genes [BR:
vnl01504
]
D3H41_05495
Transporters [BR:
vnl02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
D3H41_05495
Antimicrobial resistance genes [BR:
vnl01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
D3H41_05495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
QCO85571
LinkDB
All DBs
Position
1:1131898..1135059
Genome browser
AA seq
1053 aa
AA seq
DB search
MARFFIDRPVFAWVLAILTMLAGVMSLFNLPVSQYPTISPTTITISARYPGASAKTVEDS
VTQVIEQNMTGLDYLRYLSSSSDAFGNATITLTFDSEADPDIAQVQVQNKLQLALTSLPM
EVQNQGIVVNKSNTAFLMVVAVYSEDPDFTENDIGDFVVTNIQDPISRVTGVGQVQAFGA
QYAMRVWLDPFKLTQFNLTAIDVANAISEQNAQVSSGQLGAAPAQEGQLLNATISSASRL
SSVEEFQDIILKSDASGSNVYLKDVARVERGAESYDIRGQYNGFPASGLGISLGTGANAL
ETANAVKERLDQLSATFPEGLQIAYPFETTPFVKASIQEVVKTLLEAILLVFLIMYLFLQ
NFRATIIPTIAVPVVLLGTFAILYATGFSVNTLTMFAMVLAIGLLVDDAIVVVENVERVM
HEDGLEPKEATKKSMGQITGALIGVGLTLSAVFVPMAFMSGSTGVIYRQFSITIVAAMTL
SVLVAIILTPALCATLLKKGDAELLEKKGFFGWFNRKFDAMTAGYETGVAKLLKRTGRML
VVFLAMSAGAGWLFMNLPTSFLPDEDQGTVFSMAILPPNSTQEQTEKTLEKMRDFYLVDE
KDNVKSVFSVAGFSFAGQGQNMGMAFIGLKDWSEREAPGADAASITGRAMGYFSTIKEAL
VFAFAPPAIQELGNSTGFDFYLQDSLNKGHDALVAAQGQLLGMAAQNPKLVGVRPNGQAD
APMYKVNIDHVKLRALDVSINDVNQILSAAWGGAYINDYIDRGRVKKVMVQSDAEYRMQP
KDFDSWYVRNAKGEMVPFSAFASGEWTYGSPLLQRFDGLPAMNIQGGAAPGVSTGEAMEE
IEAMVEKLPEGFTVNWNGISYEERLSGNQAPMLYALSILVVFLVLAALYESWSVPFAVVL
VVPLGVLGAVLAVMTRSMDNDVFFQVSLLTTVGLATKNAILIVEFAKDYYEKGAGLIEAT
LHAVRVRLRPIIMTSLAFGLGVVPLAISSGVGSAGQNAVGTGVLGGMISATILGIFFVPI
FFVVVERLFDRRARKESEAELSETSTKPTQQSE
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atggcacgattttttatcgatcgtccggtatttgcttgggttctcgcgattctaacgatg
ttggcgggggtaatgtcattattcaatttacccgtctcgcaatacccaacgatttcaccg
acgacgatcaccatcagtgctcgctatccaggtgcatcagcaaaaaccgttgaagactcg
gtaacgcaagttatcgagcaaaacatgacgggattagattaccttcgctacctatcatcg
agcagtgatgcatttggtaatgcgacaattaccctgacgtttgatagcgaagctgatcct
gatatcgcgcaagtacaggtgcagaacaaactgcaattggcattgacttcattgccgatg
gaggtacaaaaccaaggtattgtcgtcaataaatccaatacggcatttctcatggttgtc
gcagtttattctgaagatcctgactttacagaaaacgatatcggcgactttgttgtaacg
aatattcaagacccgataagtcgtgtaactggcgtaggacaagtgcaggcgtttggtgcg
cagtatgcgatgcgagtttggctggatccatttaagcttacgcaattcaacttgaccgca
atcgatgtagcgaacgcgatcagtgaacagaacgcgcaagtttcttcaggtcaacttggt
gcagcacctgcgcaggaaggccagttgttgaatgcaacgatttcgtctgcaagtcgtttg
agcagtgtggaagagttccaagacatcattcttaagtctgacgccagtggttctaatgtt
tatttgaaagatgttgctcgtgttgaacgtggtgcagaaagttatgatattcgaggccaa
tataatggcttcccagcgtcggggttaggtatttcattaggtactggcgcaaacgcgctt
gagacagccaatgcggtaaaagagcgcttagaccaactgagtgctacgttcccagaaggg
ttgcagattgcttacccatttgaaacgacgccattcgtcaaagcctcgattcaagaagtg
gttaaaacgctattagaagccattcttcttgtgttcttaatcatgtatctgttcttgcag
aacttccgtgcgacgatcattccaacgatcgcagtgcctgtcgtactgctcggcaccttc
gctattttgtacgcgactggatttagcgtaaacacgttaaccatgttcgcgatggttctg
gctatcggtttgttggtggacgatgccatcgttgtggtggaaaacgtcgagcgtgtgatg
catgaggatgggttagagcccaaagaagcgaccaaaaaatcgatgggacagatcactggt
gccctgattggtgtcggtttgacgctttcagcggtattcgtccctatggcgtttatgtct
ggttctaccggggttatttaccgtcagttttcaataactattgtggcggctatgacgctt
tccgttttggttgcgataattctgactccagcattgtgtgctacgttgctgaaaaaaggc
gatgctgagcttctagagaagaaaggcttctttggctggtttaaccgcaagtttgatgcg
atgacagcaggctatgaaaccggcgttgccaaacttctaaaacgcacaggtcgcatgttg
gttgtatttttggcaatgagtgcaggtgctggctggttatttatgaaccttccaacgtca
tttttgccagatgaagaccaaggcacagtattctcaatggctattttgccgcctaactca
acacaagaacagacggaaaaaacacttgagaaaatgcgtgacttttacctagtagacgaa
aaagacaatgtaaagtcagtcttctccgttgctggatttagtttcgcaggccaaggccaa
aacatggggatggcatttatcggtctgaaagattggtctgagcgtgaagcgcctggcgcc
gatgccgcttccattactggtcgagcgatggggtacttctctaccattaaagaagctttg
gtgtttgcgttcgcccctccagcgattcaagagctaggtaactcgacaggtttcgatttc
tatctccaagactcgttgaataaagggcacgatgcattagttgcggctcaagggcaactt
ctgggcatggcagcacaaaacccgaaacttgtcggtgttcgtccaaacggtcaggcagat
gcgccaatgtacaaagttaacattgaccacgtcaaacttcgtgctttggatgtcagtatc
aatgacgtaaaccaaatcctgtcagctgcatggggcggggcttacattaacgattatatt
gatcgcggtcgtgtgaagaaagtgatggtgcaaagtgatgcggaataccgcatgcagcca
aaagacttcgattcatggtacgtacgcaacgctaaaggagagatggtgcctttctctgct
tttgcgagtggcgagtggacctatggctctcctcttttgcagcgctttgatggtttgcca
gcaatgaatattcaaggcggtgcagctcctggtgtaagtactggtgaagccatggaagaa
attgaagcaatggtagaaaagctaccagaaggtttcacggtgaactggaatggtatttcg
tatgaagagcgcctttccggaaaccaagcgccgatgctatatgcgctatctatcctcgtc
gtattcttagttctcgccgctttgtatgaaagttggtcagtacctttcgccgtggtgtta
gttgttcctcttggtgtgcttggtgctgtgcttgcggtaatgacgcgcagtatggataac
gatgtgttcttccaggtgagcttattaactacggtcggcttggcaaccaaaaacgccatt
ctgattgttgagtttgcaaaggactactatgagaaaggcgctgggcttatcgaagcaacc
ctgcatgctgttcgcgttcgtctgcgcccaattatcatgacatcgcttgcttttggtttg
ggtgtggtaccacttgctatcagttcaggtgtgggatcggcaggtcaaaacgcagtaggt
accggcgtacttggtggcatgatcagtgccacgatattgggtatattcttcgtcccaatc
ttctttgtagtggttgagcgattgtttgatcgacgtgcgagaaaagagtcggaggcagag
ttgtctgagaccagcactaaacccactcagcaaagcgagtag
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