Vibrio neocaledonicus: D3H41_11865
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Entry
D3H41_11865 CDS
T06228
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
vnl
Vibrio neocaledonicus
Pathway
vnl03030
DNA replication
vnl03430
Mismatch repair
vnl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D3H41_11865
03430 Mismatch repair
D3H41_11865
03440 Homologous recombination
D3H41_11865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vnl03032
]
D3H41_11865
03400 DNA repair and recombination proteins [BR:
vnl03400
]
D3H41_11865
Enzymes [BR:
vnl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D3H41_11865
DNA replication proteins [BR:
vnl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D3H41_11865
DNA repair and recombination proteins [BR:
vnl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D3H41_11865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_4
AAA
RuvB_N
AAA_22
AAA_5
AAA_16
AAA_14
ResIII
AAA_2
AAA_18
AAA_30
UPF0181
AAA_assoc_2
PIF1
AAA_19
SKI
Motif
Other DBs
NCBI-ProteinID:
QCO86723
LinkDB
All DBs
Position
1:complement(2389120..2391225)
Genome browser
AA seq
701 aa
AA seq
DB search
MSYLALARKWRPNQFDQVVGQKHVLTALENALAQNRLHHAYLFSGTRGVGKTSIGRLFAK
GLNCETGITATPCGKCDTCREIDEGRFVDLLEIDAASRTKVEDTRELLDNVQYKPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKPISV
DDIHQQLDYILGQEQVSAEPKALGMISHAADGSMRDALSLTDQAIALGNGAVQADIVSHM
LGTIDTDQAIHLLESISSKKPQQAMDKIQQLAANGVEWDGLLQQVATQLHRIAMYQALPA
SLDRAQPDAEKIELLSKALSPQDVQLYYQIALKGREDLTLSPNGRVGLEMIVLRMMAFRP
SNNSGANVVSSNCEPASSPAQSTSQPKAAPAQTAAAPRAQQPSPAQSSPQVAPQPSSNSQ
PEYHASGYETVPPQYDMAPPMSENPAPQHETPPQQVQESVSTPARGGLSGLRHQLRSQRQ
GLQQNTPQNGGSKKPKAASAQPESVIDRVAQLHGNSAQVSPNSAPKSTEPQVEEAYRWRP
SKPVETKVNTKLTPTQLKQALEHEKTPEMAQKLIDESLEHNEWAKLISLMEIPKLVEQLA
LNSHYSKEGTTVSLLLRSSQAHLNTDRAQAELLKALNTVLGEECHMSIEIGESGETPLEL
RDRLYQEKLQQALNSLENDPNVQFIERRFAAELDKDSVRPI
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgagttatttagctttagcgcgaaaatggcgtcctaatcagtttgaccaagttgtcgga
caaaaacatgtcctgacggcgttggaaaacgcactggcgcaaaaccgtttacaccatgct
tatctgttcagcgggactcgtggtgtgggtaaaacgagtatcggtaggctgtttgccaaa
ggcttgaactgcgaaaccggcattaccgcgacaccttgtggtaagtgtgatacttgtcgt
gaaattgatgaaggtcgctttgtcgatcttcttgaaatcgacgcagcatcacgtactaaa
gttgaagacactcgtgaactgttagacaacgttcaatacaaacctgctcgtggacgtttt
aaagtgtacctcatcgatgaggtgcacatgctatcgcgtcactctttcaatgcgttgttg
aaaaccctggaagagccgccagagtatgtgaagttcttactcgcaacaactgatccacaa
aagctgcctgtcactatattgtcgcgttgtcttcagtttcatctgaaaccaatcagcgtt
gatgatattcaccagcaacttgattacatcctaggtcaagagcaagtttcagcagagcca
aaagcgttgggtatgatctcacatgctgcagatggcagtatgcgtgatgctctcagcttg
actgatcaagcaattgctttaggtaacggtgcggtgcaagccgatattgtcagccacatg
ttggggacgattgataccgaccaagcgattcacttactagagtcaatcagcagcaagaaa
cctcaacaagctatggataaaatccaacaattagcggcaaatggtgttgagtgggatggt
ttgttgcagcaagtcgcaacacagttacaccgaattgcgatgtatcaagcgttgcccgcg
tcgttagaccgagcacaaccagatgcagagaaaattgagctgttgagcaaagctctaagc
ccgcaagacgttcagctttactatcaaattgcattgaaaggtcgtgaagatttgaccctc
tcgccaaatgggagagtcggtttggaaatgattgtgctgcgtatgatggcgttccgtcca
tcaaataacagtggggcaaatgttgtttctagtaactgcgagccagcgtcatctccggct
caaagtaccagtcaaccaaaggctgcgccagctcagacagccgctgctcctcgagctcag
cagccgagtccagcacaaagctcaccacaagtggcgcctcaaccttcatccaattcacaa
cctgaatatcacgcgagtggatatgagacggttccgccacagtatgatatggcgccgccg
atgagcgaaaaccctgcaccgcagcatgaaacgccacctcaacaagtgcaagagagcgtt
tcaacaccggcgcgcggtggtctaagcggtttacgtcaccaattacgttctcagcgtcaa
ggcctacaacagaacactcctcaaaatggtggctcaaaaaagcctaaagcggcatctgca
caaccagaatcggttatcgaccgagtagcgcaattgcatggcaattccgcgcaggtgtcg
ccaaactcagctccgaagtcgacggagccacaagttgaggaagcgtatcgctggcgtcca
agcaagcctgttgagacaaaagtaaatacaaaactgacacctacgcagctcaagcaggca
cttgagcatgagaaaacgcctgaaatggcacaaaagctcatcgatgagtcattagaacat
aatgaatgggcgaagctaatcagcttaatggagatccctaagctggtagagcaacttgcg
ctaaactctcattatagtaaggaaggaacaaccgtttcgttactattgagaagcagccaa
gctcatttgaatactgatagagctcaagccgaattgctcaaagcacttaataccgtgtta
ggtgaagagtgccacatgagcatcgaaataggggagagtggagaaacaccacttgaactg
agagataggctctaccaagagaaattacagcaagcgctgaacagtttagaaaacgatcca
aatgttcaatttattgaacgtcgttttgctgcagagcttgataaagatagtgtgcgccct
atctaa
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