Vibrio navarrensis: IF132_18460
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Entry
IF132_18460 CDS
T07785
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
vnv
Vibrio navarrensis
Pathway
vnv00550
Peptidoglycan biosynthesis
vnv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vnv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
IF132_18460 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
vnv01003
]
IF132_18460 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vnv01011
]
IF132_18460 (mrcB)
Enzymes [BR:
vnv01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
IF132_18460 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
IF132_18460 (mrcB)
Glycosyltransferases [BR:
vnv01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
IF132_18460 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
vnv01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
IF132_18460 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
QOD70603
LinkDB
All DBs
Position
1:2519860..2522223
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AA seq
787 aa
AA seq
DB search
MSKTVKGTDNAKKKTPQKSKRSATPRRPAAKQKAKRHWLRILWSFSWKCAVALMALLVFI
GIYLDSVVKQRFEGQLFDLPTVVYARILTLSPGDAFSRQELQNELDVLNYRKVSHPKFPG
EYAASSSKIELIRRPFEFADGPEPDRHVMLHFDSGTLNRIQSLESTGDLGYLRLEPKMLG
MLEKDSEEQRLFLRREQFPEIIVDALLVTEDRHFYQHDGVSPLAIARAMLVNFKAGRTVQ
GGSTLTQQLAKNLFLTQERTLWRKLREAYIALILDYRYSKDRILEAYLNEVYLGQSGNQA
IHGFALASRYYFGQPIQELRIDQLAMLVGMVKGPSYYNPVRFPERTQERRDLVLRLMMQQ
GLLSAQAYEQAASRPLDIQPTPRIASRQPAYFQQLSMELKQKVGDVFRGESGLRVFTSLD
PVSQEKLELAIGVKMPELEKVSGEALEAAAVAVDRHSGEIRAMVGGKRTGYDGFNRAINA
SRPIGSLVKPAVYLTALSQPEKYNLATTLQDTPLSLQGSKGSVWEPRNFDRQFRGDVPLY
LALAKSLNVPTVRLGMQLGIENVSQTLEKLGVKRDEIRPVPSMFLGAFSLTPIEVAQMYQ
TVTNSGRKAPLTALRSVVDLDGNVLYQSLPKSSLAVDEQAAWLTTYAMKQGVAQGTGRYL
QNQFAWAALAGKTGTSNDSRDSWFVGVDGREVTTIWLGRDDNKPTKLTGSSGALRVYAEY
LKQRIPEKLLLPWPKQITTMGYKQQPAGALVLDCAEKTFTLPVWDKDEALKRQCEQSGNW
LNKLLNW
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaacagtaaaaggcactgacaacgcgaagaaaaaaacgccgcaaaaaagcaag
cgcagtgctacgcctcgccgcccagccgctaagcaaaaagcgaaacgccattggctacgt
attctgtggtcgtttagttggaaatgcgccgtggcgctgatggcgctgctggtgtttatc
ggcatttatcttgatagcgtggttaaacagcgttttgaagggcagttgtttgatctccca
accgtggtgtatgcgcgcatcttaacgctttcgcccggcgatgcgttttctcgtcaggag
ttacaaaacgaactggacgtactcaactaccgtaaagtcagccaccccaagttcccggga
gagtacgccgcctcaagcagtaaaattgaattgattcgccgtccgttcgaatttgccgat
ggccctgagccggatcgccacgtgatgctgcattttgattcaggtacgctcaatcgcatt
caatcgctcgaatcgacaggtgatctcgggtatctgcgtttagagccgaagatgctggga
atgttggaaaaagacagcgaagagcaaaggctctttctgcgccgtgagcaatttccggaa
atcatcgtcgatgccttgcttgtgactgaagatcgtcacttttatcagcacgatggcgtt
tcaccgctggcgattgcgcgcgcgatgttggtcaattttaaagcaggccgaaccgtgcaa
ggcggcagtaccttgactcagcagttagcgaaaaacctgtttttgacccaagagcgcacc
ttgtggcgcaagctgcgtgaagcgtatatcgcgttgattctcgactatcgttacagcaaa
gatcgcatcttagaagcctatctcaatgaggtgtatttgggacaaagtggcaaccaagcg
atccacggctttgctttggcgtcgcgttactactttggccaaccaatccaagagctgcgt
atcgaccaattagccatgctagtcggtatggtcaaagggccttcttactacaacccagta
cgctttcccgagcgaacgcaggagcgtcgcgatttggttttgcgtctgatgatgcagcaa
ggactgctcagtgcccaagcctacgaacaagcggccagtcgtccgctagatattcagccg
acgccccgcatcgccagccggcagccggcgtattttcaacagttgtcgatggaattgaaa
cagaaagtgggcgacgtttttcgtggtgagagcggtttgcgtgtgtttacttcgcttgat
cctgtgtcgcaagagaaacttgaactcgccattggtgtgaaaatgcccgagctggaaaaa
gtgtcgggagaggcgcttgaagcggcggcggtggcggtcgatcggcatagcggtgaaatt
cgtgccatggttggtggcaaacgtaccggctacgatggttttaaccgagcgatcaacgcc
agtcgtccgattggctcattagttaagccggcggtctatctcacggcgctgtctcagcct
gagaaatataacttggcgaccacgctgcaagatacgccgctcagtttgcaaggcagtaaa
ggttcggtgtgggagccgcgcaattttgatcgtcagtttcgtggcgatgtgccgctctat
ttagcgctggcgaaatcgctcaatgtaccgaccgtgcgccttggcatgcaactggggatt
gaaaacgtctcgcaaacactagagaaactgggcgtcaagcgtgatgaaattcgcccggtg
ccttcgatgtttttgggcgcattttcgctcacgccgattgaagtggcgcagatgtaccaa
accgtgaccaactccggtcgcaaagcgccgcttaccgcattgcgctccgtggtcgatctc
gatggcaacgtcttgtaccaatccctgccgaagtcttctcttgcagtcgatgaacaggcg
gcgtggttgaccacctatgcgatgaaacaaggggtcgctcagggaactggccgctatctg
caaaatcagtttgcttgggcggcactagcggggaaaacgggtaccagtaacgatagccgc
gacagttggtttgtcggtgtcgacgggcgtgaagttaccaccatttggttggggcgcgat
gacaataaaccgaccaaactgactggttccagcggcgcgctgcgcgtgtatgcagaatat
ctgaagcagcgcattcctgaaaaactgttgctgccttggccaaagcagatcaccactatg
gggtacaaacagcagccagccggagcgttggtgctcgattgtgcggaaaaaaccttcact
ttacccgtatgggataaggatgaggcactgaagcgtcaatgtgaacaatctggcaattgg
ttgaataaattactgaactggtga
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