Vogesella sp. XCS3: LCH97_08500
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Entry
LCH97_08500 CDS
T07617
Name
(GenBank) Ig-like domain-containing protein
KO
K20276
large repetitive protein
Organism
vog
Vogesella sp. XCS3
Pathway
vog02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vog00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LCH97_08500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_13
Big_6
DUF4347
Big_3_5
Big_3_3
Big_7
Motif
Other DBs
NCBI-ProteinID:
UDM18678
LinkDB
All DBs
Position
complement(1790566..1800162)
Genome browser
AA seq
3198 aa
AA seq
DB search
MMKPARRPTTVPSPVRSSLLVLEPRIMFDAAGGAELLDALLTQHVAEQAAEADHVTTLLA
GAGGENELAAAPVQVVFVAPGLGELGGFAAGSEVVRLQAGSDPLQQMATYLQNRQGVAAI
HILSHGQAGQLMLGDVTLTAANLSQYQAQLSTLGQSLSPGGDILLYGCSIGAGADGQALI
QRLASFTGADIAASNDATGAASLGGDWVLESKQGEVNTDALALAYDALLARPVTGTTDFI
TSNGNSYNPSGNVINTGNLQGWDFTLQLASSSNGNQVVIVGDPGTVNKILVNGYSDGTLL
ISYMAVKSNDNSRFTLGSIAVALSGHSGSGSGGNVQLVGYVGATAVNGAILTQYVTDTLV
DNSSVVTFDVTANSAFRGIDSFRVMADGGYTINYMISIGQINANFNAPTLTSSGGASAFS
AGSGAAVVVDSGITLTDSDSGTQASATVSITGNFQSAEDVLAFSNTNSTTYGNIAASYNS
GTGVLTLTSSGGSATLAQWQAALRAVTYQDSALSPNTGGRTISFAINDGTNSSAVVTKTV
TLTANAAPVLSNLAGDSTTFTEKGSAVLLDTGSAVSISDGDTSNFNGGSLTVSITANGQS
GQDVLGISTGGTVSLSSGTSVGSTVSVGGVAVGVIAANGDGSGGHNLIVTLNSNATAARM
STLVAALTYQNSSTTDPVTATRTINISLNDGRGGTGSSNVSVALAAVNDAPTGTATGSTP
TLSAGGAAVSLFASASFSTVESSQSISQLVFTVTGLADGSSEILAIDGSNVALTHGNSVT
TVGNGVSVSVSVSGSTATVTLVSGAGLSTSTIAGIVNGMTYRDSSASPTAGNRVITLGSI
KDNGGTANGGADTSIVSLAATVNVLAAGPSIGLSGGSAAFVSGDNTSSTPIAVDSAITVA
DPASPTIASGTVAITGNFQSGQDVLAYTNNGSTMGNITGSYNAATGVLTLTSSGATATLA
QWQAALRAVTYTSTAISPNTATRTISLQINDGSNSSTVVTRSISVTATAQTPILTASAGS
AAFTAADNAASTPVVVDSGLTVADLDSSAFSSAQVSISGNFQSAQDSLAFSNTSASAFGN
ISASYNAATGVLTLSSSGATATLAQWRAALQAVTYGNSAVTPNTATRTISFTLNDGSKTS
AAVTRTVTVAATDQTPVVTASGGSAAFVSGDNTASTAVAIDAGLVLSDLDSTTLSTARVS
IAANFQSAEDVLAFSNTNATTYGNIAASYNSATGVLTLTSSGATATLAQWQAALRAVTYT
DTAITPVTASRTVSVVVSDGSKDSAQVTRTITLTAIAQTPVVTGSGGSASFVLGGGAIVV
DSGVTLSDRDSATLASATVSVSGSFQAGEDVLAFSNTNSSTFGNISASYNAGTGVLTLTS
AGASATLAQWQAALRAVSYTDTAITPNTTNRTISFSVNDGAVSSSIATRSVTMQLPTPTI
AGLTTATDTGSSNSDGQTSNATPTVTGSAQAGSTVTVYIDGNAAGTTTASGLGAWSFNIP
SALASGSHAITVRAAVGSVNSAQSSAYSVTIDTTAPTAPAISGLSAGSDSGSSASDGITN
QTTPTVQGSAEAGSTVTIYVDGNAVGTATANGSGAWSYTLPSALGSGSHSLRATSTDSSG
NVSAQSSAYSVTIDTTAPSAPAISGLSAGSDSGSSASDGITNQTTPTVQGSAEAGSTVTI
YVDGNAVGTATANGSGAWSYTLPTALGSGSHSLRATSTDSSGNVSAQSSAYSVTIDTTAP
SAPAISGLSAGSDSGSSASDGITNQTTPTVQGSAEAGSTVTIYVDGNAVGTATANGSGAW
SYTLPTALGSGSHSLRATSTDSSGNVSAQSSAYSVTIDTTAPSAPAISGLSAGSDSGSSA
SDGITNQTTPTVQGSAEAGSTVTIYVDGNAVGTATANGSGAWSYTLPTALGSGSHSLRAT
STDSSGNVSAQSSAYSVTIDTTAPSAPAISGLSAGSDSGSSASDGITNQTTPTVQGSAEA
GSTVTIYVDGNAVGTATANGSGAWSYTLPTALSSGSHSLRATSTDSSGNVSAQSSAYSVT
IDTTAPSAPAISGLSAGSDSGSSASDGITNQTTPTVQGSAEAGSTVTIYVDGNAVGTATA
NGSGAWSYTLPTALGSGSHSLRATSTDSSGNVSAQSSAYSVTIDTTAPSAPAISGLSAGS
DSGSSASDGITNQTTPTVQGSAEAGSTVTIYVDGNAVGTATANGSGAWSYTLPTALGSGS
HSLRATSTDSSGNVSAQSSAYSVTIDTTAPSAPAISGLSAGSDSGSSASDGITNQTTPTV
QGSAEAGSTVTIYVDGNAVGTATANGSGAWSYTLPTALGSGSHSLRATSTDSSGNVSAQS
SAYSVTIDTTAPSAPAISGLSAGSDSGSSASDGITNQTTPTVQGSAEAGSTVTIYVDGNA
VGTATANGSGAWSYTLPTALGSGSHSLRATSTDSSGNVSAQSSAYSVTIDTTAPSAPAIS
GLSAGSDSGSSASDGITNQTTPTVQGSAEAGSTVTIYVDGNAVGTATANGSGAWSYTLPT
ALGSGSHSLRATSTDSSGNVSAQSSAYSVTIDTTAPSAPAISGLSAGSDSGSSASDGITN
QTTPTVQGSAEAGSTVTIYVDGNAVGTATANGSGAWSYTLPTALGSGSHSLRATSTDSSG
NVSAQSSAYSVTIDTTAPTAPAISGLSAGSDSGSSASDGITNQTTPTVQGSAEAGSTVTI
YVDGNAVGTATANGSGAWSYTLPTALGSGSHSLRATSTDSSGNVSAQSSAYSVTIDTTAP
SAPAISGLSAGSDSGSSASDGITNQTTPTVQGSAEAGSTVTIYVDGNAVGTATANGSGAW
SYTLPTALSSGSHSLRATSTDSSGNVSAQSSAYSVTIDTTAPTATVVLLDANPSSNSALR
YQIIFAEEVEDIPLSAFSLAGEASGVLAGVQRLDGKTYLVSVANAAGSGDLLLRIDGNSV
RDKAGNAVAGTVSGRYTLLPVVVAPDDLPPVVSSDPAPVQESVASSQTVVLASVSDSDAA
SRASLPLYGSEALGLPQTLVASTGVQVIAVEVNERQAQAIEVRIAQVTQSIALQQSFSFT
LPQGTFSVRSGSSLSLEARQSNGQPLPAWVRFDPVSGQFSGQLPAGFTRPLDIVVTVRDS
QGNQGVARIKLDPGGNGNTGEAPAQRSATSPVSRARPDAAPDGKPALVEQLAQQGSKGFG
QAVNALLHAAAKVVTREG
NT seq
9597 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaacctgcccgtcgccccaccaccgtgccttcgcctgtacggtcttctttgctg
gttctggagccgcgcatcatgtttgatgctgcgggaggcgcagagctgctggacgcgctg
ctgacgcagcatgtagccgaacaagccgcagaggctgaccacgtaactaccctgttagcc
ggggcgggcggggagaacgagttggccgcagcgccggtacaggtggtgtttgtggcgcca
ggtctgggcgagctgggtggttttgcggcgggtagcgaggtggttcgcttgcaagccggt
agcgacccgctgcagcaaatggccacgtatctgcaaaatcggcagggtgtcgcggccatt
catatcttgtctcacggccaagcaggccagctgatgctgggcgacgtgacactgactgcg
gccaacctgtcgcagtatcaggcgcagctgtctaccctggggcaaagcttgtcgcctggc
ggcgatattctgctgtacggctgcagcattggcgccggcgctgatggccaggccttgatc
cagcgcctggccagctttaccggtgccgatatcgcggcttcaaacgatgccaccggcgcg
gcgtcactggggggggactgggtgctggaaagcaagcagggcgaagtgaataccgatgcg
ctggcgctggcttacgatgcgctgttagcccggccagtaacaggtacgaccgatttcatc
acctcaaatggcaatagttataacccgtcaggtaatgttattaatactggcaacctgcag
ggctgggattttactctgcaattggcttcctccagtaatggtaatcaagtagttatcgtg
ggtgatcctggtacggttaacaagatactggtgaatggctatagcgacggcactctgctt
atttcatacatggcggtgaaatctaatgataatagccgctttaccttgggtagcatcgca
gtagcgctgtctggtcatagtggttcgggcagtggtggtaacgtgcaattggtagggtat
gttggtgctacagcagtaaacggtgcaattctgacccagtatgtgacagatacactcgtc
gataacagcagcgttgttacgtttgatgtaacggctaattcggcctttcgcggtattgat
tcattccgcgtcatggctgatggtggttatactattaactacatgattagtattggccag
atcaatgctaattttaatgcaccaaccttgaccagctcgggcggtgccagcgcatttagt
gccggttccggtgcagcggtggtagtggatagcggtatcacgcttactgactcggacagt
ggtacccaggccagtgccacggtgtccattaccggcaacttccagagcgccgaggatgta
ctggcgttcagtaataccaatagcacgacctacggcaatattgccgccagctataacagt
ggcaccggggtgctcacccttacctccagtggcggcagcgcgacgctggcgcaatggcag
gcggcgctacgggcggtaacgtatcaggacagcgccctgagccccaataccggcggccgt
accatcagctttgcgattaatgatggtactaacagcagcgccgtggtgacaaaaaccgtc
acgcttacggccaatgccgcgcctgtgctgagcaacctggccggggatagcacgaccttt
accgaaaagggcagtgcagtgctgctggataccggtagcgcggtcagcataagcgatggt
gataccagtaatttcaacggcggcagcctgacggtcagcatcacggctaatggccagagc
gggcaggatgtgctgggtatcagtaccggggggacggtgtcgctcagcagtggtaccagc
gtgggcagtacggtatcggtaggaggtgttgccgtgggcgtgattgcggccaacggtgac
ggtagcggtggccataatcttatcgtcacgctcaatagcaacgccacggcagcacgcatg
tccacgctggtggcggcactgacttaccagaacagcagcaccaccgacccggttacggca
acgcgaaccatcaatatcagcctgaacgacggccgtggggggacgggttccagtaatgtc
agcgtggcactggctgcggtgaatgatgcgcccacaggcaccgccactggcagcacccct
accttgagtgctggcggggctgccgtatcgctgtttgctagtgccagtttttccacggtt
gaatcatcgcagagtatcagccagctggttttcactgtaacgggcctggcagatggcagc
agtgaaattctggctattgatggcagcaatgtggcactgacccatggtaacagtgtgacc
actgtcggtaacggggtgagcgttagcgtatcggtgtcgggtagtaccgcgacagtcacg
ctggtgagcggggcgggtttgtctaccagcacaatcgccggcatcgtcaacggcatgacc
taccgcgacagtagtgccagccccacggcgggtaaccgcgttatcaccctgggcagcatc
aaggacaatggcggcacggccaatggcggggcagacacaagtatcgtgtcgctggctgct
accgtgaatgtgctcgcggccgggccgtcgattggcctgagcggtggtagcgcggcattt
gtttcgggtgacaataccagctccacaccaattgctgtcgatagcgccatcacggtggcc
gaccccgccagcccgacgatcgccagtggtaccgtcgccatcaccggtaacttccagagt
ggccaggatgtcttggcgtataccaataatggcagcaccatgggcaatatcacgggtagc
tacaacgcggcgaccggtgtactgaccctgacatcgagtggtgctaccgctaccctggcg
cagtggcaggccgctttgcgggcggtaacctataccagcaccgcgatttcccccaataca
gccacgcgcaccatcagcctgcaaatcaatgacggcagtaatagcagtacggtggttact
cgcagcatctcggtaactgccacggcacagacgccgatactcaccgcctcggctggcagt
gcggcctttacagctgctgacaatgcagcctctacgccagtggtggtcgatagtggcctg
acggtagccgacctggacagtagtgctttcagcagtgcgcaagtcagtatcagcgggaac
ttccagagtgcgcaggatagtttggccttcagtaataccagtgcgtcggcctttggcaac
atcagcgccagttataacgctgctacaggtgtactgacgctgagctccagtggtgctacc
gctacgctggcgcagtggcgtgcagccttgcaggccgtgacttatggcaatagtgccgtc
acccccaatacggctacgcgtaccatcagctttaccctaaacgacggtagcaaaaccagt
gcggcagtgacccgcactgtaacggtagccgccaccgaccagacccccgttgttactgcc
agtggtggcagtgccgcgtttgtgtctggcgataatacggcctccacagcggtagccatc
gatgctgggctggtgttgagtgacctggattccaccacgctatctacggccagggtaagc
attgcggccaacttccagagtgccgaagatgtcctggcattcagtaataccaatgccact
acgtatggcaatatcgcggcaagttataacagtgccacaggtgtgctaacgcttacctct
agcggggcgacggctactctggcgcagtggcaggcagcattgcgcgcagtcacgtatacc
gataccgccattacgccggtaacagccagccgcaccgtcagcgtggtggtgagtgacggt
agcaaagacagcgcccaggtgacgcgaaccatcacgcttaccgcaatagcgcaaacacct
gtcgtgaccgggtctggtggcagtgccagcttcgtcttgggggggggcgcaattgtggtg
gatagtggcgtgaccttatccgaccgcgatagtgctacattggccagcgcaaccgtttcg
gtaagcggcagctttcaggccggcgaggatgtactggccttttcgaacaccaatagcagc
acttttggcaatatcagcgccagctacaatgctggcaccggtgtgctcacgctgacctct
gccggtgctagcgcaaccctggcgcaatggcaggctgctttgcgtgccgtcagttatacc
gacacagccattacccccaatacgaccaatcgcaccatcagctttagcgtcaacgatggt
gctgtcagcagtagtattgctacgcgctccgtcaccatgcagctgcctacgcctaccatt
gcgggtttgacgacagctaccgatacgggatctagcaatagcgatggccagaccagcaac
gctacgccaacggtaaccggcagtgcgcaagcaggcagtactgtcaccgtttatatcgat
ggcaacgccgcaggtacgacaactgccagcgggctgggggcgtggagcttcaatatccct
tcagcgctagccagcggtagccacgccattacggtgcgggcagccgttggcagtgtcaac
agcgcccaatccagcgcctacagcgtcaccatcgacaccaccgcgccgaccgccccggcc
atcagcggcctgagtgccggtagcgacagcggcagcagcgccagtgacggcatcaccaac
cagaccacccctaccgtgcaaggcagcgccgaggccggtagcacggtgactatctacgtg
gatggcaacgccgttggcaccgccacggccaacggtagcggggcgtggagctacacgctg
cctagcgcactgggtagcggcagccacagcctgcgtgccaccagcaccgacagcagcggc
aacgtcagcgcccaatccagcgcctacagcgtcaccatcgacaccaccgcgccgagcgca
ccggccatcagcggcctgagtgccggtagcgacagcggcagtagcgccagcgacggcatc
accaaccagaccacccccaccgtgcaaggcagcgccgaagcgggtagcaccgtcacgatc
tacgtggatggcaacgccgtcggtaccgccacggccaacggtagcggggcgtggagctac
acgctgcctaccgcactgggtagcggcagccacagcctgcgcgccaccagcaccgacagc
agcggcaacgtcagcgcccaatccagcgcctacagcgtcaccatcgacaccaccgcgccg
agcgcaccggccatcagcggcctgagtgccggtagcgacagcggcagtagcgccagtgac
ggcatcaccaaccagaccacccccactgtgcaaggcagcgccgaggccggtagcacggtg
actatctacgtggatggcaacgccgtcggtaccgccacggccaacggtagcggggcgtgg
agctacacgctgcctaccgcactgggtagcggcagccacagcctgcgcgccaccagcacc
gacagcagcggcaacgtcagcgcccaatccagcgcctacagcgtcaccatcgacaccact
gcgccgagcgcaccggccatcagcggcctgagtgccggtagcgacagcggcagtagcgcc
agcgacggcatcaccaaccagaccacccccaccgtgcaaggcagcgccgaggccggtagc
acggtgactatctacgtggatggcaacgccgtcggtaccgccacggccaacggtagcggg
gcgtggagctacacgctgcctaccgcactgggtagcggcagccacagcctgcgcgccacc
agcaccgacagcagcggcaacgtcagcgcccaatccagcgcctacagcgtcaccatcgac
accaccgcgccgagcgcaccggccatcagcggcctgagtgccggtagcgacagcggcagt
agcgccagcgacggcatcaccaaccagaccacccccaccgtgcaaggcagcgccgaagcg
ggtagcaccgtcacgatctacgtggatggcaatgccgtcggtaccgccacggccaacggt
agcggggcctggagctacacgctgcctacggcgctgagtagcggcagccacagcctgcgc
gccaccagcaccgacagcagcggcaacgtcagcgcccaatccagcgcctacagcgtcacc
atcgacaccaccgcgccgagcgcaccggccatcagcggcctgagtgccggtagcgacagc
ggcagtagcgccagcgacggcatcaccaaccagaccacccccaccgtgcaaggcagcgcc
gaagcgggtagcaccgtcacgatctacgtggatggcaacgccgtcggtaccgccacggcc
aacggtagcggggcgtggagctacacgctgcctaccgcactgggtagcggcagccacagc
ctgcgcgccaccagcaccgacagcagcggcaacgtcagcgcccaatccagcgcctacagc
gtcaccatcgacaccaccgcgccgagcgcaccggccatcagcggcctgagtgccggtagc
gacagcggcagtagcgccagtgacggcatcaccaaccagaccacccccactgtgcaaggc
agcgccgaggccggtagcacggtgactatctacgtggatggcaacgccgtcggtaccgcc
acggccaacggtagcggggcgtggagctacacgctgcctaccgcactgggtagcggcagc
cacagcctgcgcgccaccagcaccgacagcagcggcaacgtcagcgcccaatccagcgcc
tacagcgtcaccatcgacaccactgcgccgagcgcaccggccatcagcggcctgagtgcc
ggtagcgacagcggcagtagcgccagcgacggcatcaccaaccagaccacccccaccgtg
caaggcagcgccgaggccggtagcacggtgactatctacgtggatggcaacgccgtcggt
accgccacggccaacggtagcggggcgtggagctacacgctgcctaccgcactgggtagc
ggcagccacagcctgcgcgccaccagcaccgacagcagcggcaacgtcagcgcccaatcc
agcgcctacagcgtcaccatcgacaccaccgcgccgagcgcaccggccatcagcggcctg
agtgccggtagcgacagcggcagtagcgccagcgacggcatcaccaaccagaccacccct
accgtgcaaggcagcgccgaggccggtagcacggtgactatctacgtggatggcaacgcc
gttggcaccgccacggccaacggtagcggggcgtggagctacacgctgcctaccgcactg
ggtagcggcagccacagcctgcgcgccaccagcaccgacagcagcggcaacgtcagcgcc
caatccagcgcctacagcgtcaccatcgacaccactgcgccgagcgcaccggccatcagc
ggcctgagtgccggtagcgacagcggcagcagcgccagtgacggcatcaccaaccagacc
acccccaccgtgcaaggcagcgccgaagcgggtagcaccgtcacgatctacgtggatggc
aatgccgtcggtaccgccacggccaacggtagcggggcctggagctacacgctgcctacc
gcactgggtagcggcagccacagcctgcgcgccaccagcaccgacagcagcggcaacgtc
agcgcccaatccagcgcctacagcgtcaccatcgacaccactgcgccgagcgccccggcc
atcagcggcctgagtgccggtagcgacagcggcagtagcgccagtgacggcatcaccaac
cagaccacccccaccgtgcaaggtagtgccgaggccggtagcacggtgactatctacgtg
gatggcaacgccgtcggcaccgccacggccaacggtagcggggcgtggagctacacgctg
cctaccgcactgggtagcggcagccatagcctgcgcgccaccagcaccgacagcagcggc
aacgtcagcgcccaatccagcgcctacagcgtcaccatcgacaccaccgcgccgaccgca
ccggccatcagcggcctgagtgccggtagcgacagcggcagtagcgccagtgacggcatc
accaaccagaccacccccaccgtgcaaggcagcgccgaggccggtagcacggtgactatc
tacgtggatggcaacgccgtcggtaccgccacggccaacggtagcggggcgtggagctac
acgctgcctaccgcactgggtagcggcagccatagcctgcgcgccaccagcaccgacagc
agcggcaacgtcagcgcccaatccagcgcctacagcgtcaccatcgacaccaccgcgccg
agcgcaccggccatcagcggcctgagtgccggtagcgacagcggcagtagcgccagcgac
ggcatcaccaaccagaccacccccaccgtgcaaggcagcgccgaagcgggtagcaccgtc
acgatctacgtggatggcaatgccgtcggtaccgctacggccaacggtagcggggcctgg
agctacacgctgcctacggcgctgagtagcggcagccacagcctgcgcgccaccagcacc
gacagcagcggcaacgtcagcgcccaatccagcgcctacagcgtcaccatcgacaccacc
gcgccgaccgcaacggtggtcttgctggatgccaacccgagcagcaatagcgcgttgcgc
taccaaatcattttcgccgaggaggtagaggacattcctttatccgcgtttagcctggcc
ggggaagccagcggcgtattggcaggggtgcagcggctggatggcaaaacctatctggtg
tcggtagcgaatgctgcaggtagcggtgatttgttgcttcgtatcgatggcaacagcgtg
cgggacaaggcaggcaatgcggtagccggaacggtaagcgggcgttacaccctgctacct
gtggtggttgcacctgacgacttgcccccggtggtcagcagtgaccctgcgccagtacag
gaaagcgtggccagtagccagacagtggtgcttgccagcgtgagtgacagtgatgctgct
agccgggccagtttgccgctttacggtagcgaggcgctgggcctgccccagaccctggta
gccagtaccggtgtgcaggtgattgcggtagaggtcaacgaaaggcaggcgcaggccata
gaagtgcgtattgcacaggtgacgcagtcgatagccctgcagcaaagcttcagtttcact
ttgccacagggtacgttcagcgttcgtagcggcagcagtctgtcgctggaagcacggcaa
agcaacggccagccgctgccggcatgggtccgttttgaccctgtcagtggccagttctcc
ggccagctgccagccgggtttacccggccgctggatatcgtggtgacggttcgcgacagc
cagggcaaccagggggttgctcgcatcaagctggacccgggggggaatggcaataccggt
gaagctcctgcccagcgcagcgcgaccagcccggtgtcacgcgcgcggcctgatgcggcg
ccggatggcaagccggcactggtcgaacagctggcacagcaaggcagtaaaggatttggc
caggcagtcaatgcgctgttgcacgccgcagccaaggtggtgactcgtgaagggtaa
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integrated database retrieval system
