Vogesella sp. XCS3: LCH97_11670
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Entry
LCH97_11670 CDS
T07617
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
vog
Vogesella sp. XCS3
Pathway
vog00521
Streptomycin biosynthesis
vog00523
Polyketide sugar unit biosynthesis
vog00541
O-Antigen nucleotide sugar biosynthesis
vog01100
Metabolic pathways
vog01110
Biosynthesis of secondary metabolites
vog01250
Biosynthesis of nucleotide sugars
Module
vog_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
vog00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
LCH97_11670 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LCH97_11670 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LCH97_11670 (rfbC)
Enzymes [BR:
vog01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LCH97_11670 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UDM15957
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Position
complement(2435382..2435930)
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AA seq
182 aa
AA seq
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MNIIDTAITDVKIIEPKVFGDERGFFYESFSQRLFDEAVGHRVDFVQDNHSRSARGVLRG
LHYQLPPYAQGKLVRCTVGEVFDVAVDIRRSSPTFGQWVGVHLSAENKRQLWIPAGFAHG
FVTLSEHAEFLYKTTQYYAPSHDRGILWNDPAIGIAWPDAGTLQLSGKDQVQPLLAAAEL
FD
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcatcgataccgccattactgatgtcaaaatcatcgaacccaaagtgttcggc
gacgagcgtggttttttctacgaaagtttcagccagcgcctattcgacgaggccgtgggc
catcgcgttgacttcgtgcaggataaccacagccgttcggcacgaggtgtgctgcgcggc
ctgcattaccagctaccgccctatgctcagggcaagctggtgcggtgcactgtgggcgag
gtatttgacgtggcggtagacatccgtcgcagttcgcctaccttcgggcaatgggtgggc
gtgcacctgtcggcggaaaacaagcgtcagctatggattcctgcaggttttgcccacggt
tttgtcaccctcagcgaacacgccgagtttttgtacaagactacccagtactacgcaccc
agccacgaccgcgggatcttgtggaacgaccctgccatcggtattgcctggccggacgcc
ggtacgttgcagctgtccggcaaagaccaggtgcagcctttgctggctgcggccgagctg
tttgactaa
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