Vogesella sp. XCS3: LCH97_16485
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Entry
LCH97_16485 CDS
T07617
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
vog
Vogesella sp. XCS3
Pathway
vog01501
beta-Lactam resistance
vog01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vog00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LCH97_16485
01503 Cationic antimicrobial peptide (CAMP) resistance
LCH97_16485
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vog02000
]
LCH97_16485
01504 Antimicrobial resistance genes [BR:
vog01504
]
LCH97_16485
Transporters [BR:
vog02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LCH97_16485
Antimicrobial resistance genes [BR:
vog01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LCH97_16485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Patched
Late_protein_L2
Motif
Other DBs
NCBI-ProteinID:
UDM16857
LinkDB
All DBs
Position
3453174..3456305
Genome browser
AA seq
1043 aa
AA seq
DB search
MFSAFFVRRPIFASVISIVILLAGFFGMRALPVEQYPQIVPPSVAVTANYPGASAEVVAD
TVASPLEQAINGVDDMLYLQSTSSSNGRLTVTVTFKIGTNPDQATINVNNRVQSALSSLP
EEVRRQGVNVRKQAATFLQVISLYSPDKRFDTLFMSNYALLNVVDELKRIPGVGQVTNFA
GQDYAMRIWLRPDRLSQLNLTPGDVARAIREQNAQFAAGKVGGTPTAGTQPDFTYTITTQ
GRFSEVSEFENIIVRSGSGGQQVRLKDVARVELGALSYDFSGLHNGRPTIPIGINLAPGA
NQLDTAKAVQQRMDELAARFPQGLSYAIPYDTTRFVEVSIDEVIHTLAEAMVLVFAVVYL
FLQNWRATLIPGLAVPVSIVGTFAGMYIFGYSINTLTLFGMVLAIGIVVDDAIVVLENVE
RIMSQEGKPPYEATLQAMKEVSGPVVAIVLVLCSVFIPVAFLGGIAGQMYKQFAITIAIS
VTISGIVALTLTPALCALMLKPEHQHSNRFFDGFNRFFDRMTASYGNGVSFLIRRSLLAL
VMFGVLIGASVWLFKLIPSSLAPEEDQGYIIAATILPDGAAINRTQSVMNRFDKQIAANP
AVKDVMSFAGFDILSGTNRSNTGVTFITLKPWDERKAPNLSAQAVVGDVFQKGMMVPEGL
VLAFNPPPISGMSSTGGFEAYLQSRNGATSAELAQQAQKLMMAAAKRPELAGVQTTFSAN
VPQLNVQLDRDKAKSLGVAVGDVFDAMSSTFGSLYVNDFSKFGRIFTVQLQSEADFRDSV
EDLRNVFVRGQNGQMIPLTSLVTIEQRTGPEVVDRYNAFPAAKFVGGPAPGYSSGESLAA
MEQLAKEVLPDGYTLAWTGSAFQEKSTGGSSSMVFVVALLMVFLILSAQYERWTLPFAVL
TAVPFAVFGALLATWMRGLANDVYFQVALVTLIGLAAKNAILIVEFAVIKMEEGMSLADA
AIDAAKLRFRPIVMTSLAFILGCVPLAISSGAGSASRHAIGTGVIGGMLAATFIAALFIP
LFFKLIMQMSQGKAAKQGEKHEV
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgttttcagcctttttcgtacgccggccgatttttgccagcgtgatctccatcgtcatc
ctgctggccggtttctttggcatgcgggcgctgccggtggagcaatacccgcagatcgtg
ccgccgtcggtagcggtgacggccaactacccgggtgcctctgccgaagtcgttgccgat
acggtagcgtcgccgctggagcaggccattaacggcgtggacgacatgctgtacctgcag
tccaccagctccagtaacggccgcctcacggtaacggttaccttcaagatcggtaccaac
cccgaccaggccaccattaacgtgaacaaccgcgtgcagtccgcgctgtcgtcgctgccg
gaagaagtacgccgccagggcgtgaacgtgcgcaagcaggccgcgaccttcctgcaggtg
atctcgctgtattcgccggacaaacgcttcgacaccctgttcatgagcaactacgcgctg
ctgaacgtggtggacgagctcaagcgtattccgggtgtgggccaggtgaccaactttgcc
ggccaggactacgccatgcgtatctggctgcgcccggaccgcctgtcgcagctgaacctc
acgccgggtgatgtggcgcgcgccattcgcgaacagaacgcgcagtttgccgccggcaag
gtggggggcaccccgactgcgggcacgcagcctgactttacctacaccattaccacccag
ggccgtttcagcgaggtgtccgagttcgagaacatcatcgtgcgtagcggcagtggcggg
cagcaggtacgcctgaaagatgtggcacgggtagagctgggggcgctgtcgtatgacttc
tccggcctgcacaatggccgccccactattcctatcggtatcaacctggcaccgggtgcc
aaccagctggacaccgccaaggcggtacagcagcgtatggacgagttggccgcacgtttc
ccgcagggcctgtcctacgccattccgtacgacactacccgctttgtggaagtgtccatc
gacgaggtgattcacacgctggccgaagccatggtgctggtgtttgccgtggtgtacctg
ttcttgcagaactggcgcgccacgctgatcccgggcctggcggtaccggtatccattgtg
ggtacctttgccggtatgtatatctttggctattccatcaacacgttgacgctgttcggc
atggtgctggccatcggtatcgtggtggatgacgccatcgtggtgctggaaaacgtcgag
cgcatcatgtcgcaagagggcaagccgccgtacgaggctaccttgcaggcgatgaaggaa
gtgagcggcccggtggttgccatcgtgctggtactgtgctcggtgtttatcccggtggcc
ttcctgggcggtattgccggccagatgtacaagcagttcgccatcaccattgccatctcg
gtgaccatctccggcattgtggcgctgacgctgaccccggcactgtgcgcgctgatgctc
aagcccgagcaccagcacagcaaccgcttctttgacggcttcaaccgcttcttcgaccgc
atgaccgccagctacggcaacggcgtgtccttcctgattcgccgcagcctgctggcgctg
gtgatgttcggcgtgctgattggcgcctcggtatggctgttcaagctgatcccgtcgtcg
ctggcccccgaggaagaccagggctacatcattgcggccaccatcctgcccgacggcgcg
gccatcaaccgcacccagagcgtgatgaaccgcttcgacaagcagattgcggccaacccg
gcggtaaaagacgtgatgagctttgccggcttcgacatcctgtccggtaccaaccgcagc
aacaccggtgtgaccttcattaccctgaaaccgtgggacgagcgcaaagcgcccaaccta
tcggcacaggcggtggtcggcgatgtgttccagaaaggcatgatggtgccggaaggcctg
gtgctggcatttaacccgccgccgatttccggcatgtcgtctaccggcggtttcgaggcc
tatctgcaaagccgtaacggtgctaccagcgccgagctggcccagcaggcacaaaagctg
atgatggcggcagccaaacgccccgagctggctggcgtgcaaaccaccttctcggccaac
gtgccgcagctgaacgtgcagctggaccgcgacaaggccaaatcgctgggcgtagcggta
ggggacgtcttcgacgccatgagcagtaccttcggctcgctgtacgtgaacgacttcagc
aagttcggccgcatctttaccgtgcagctgcagtccgaagccgacttccgcgatagcgtg
gaagacctgcgcaatgtgttcgtgcgtggccagaacggccagatgatcccgctgaccagc
ctggtcaccatcgagcagcgtaccggccccgaagtggtagaccgttacaacgccttcccg
gcagccaagttcgtgggcggcccggcaccgggttatagctcgggcgagtcgctggcggcc
atggagcagttggccaaggaagtgctgccggacggctataccctggcgtggaccggctcg
gccttccaggaaaaatccaccggtggttcgtcgtccatggtgtttgtggtggcgctgctg
atggtgttcctgatcctgtcggcgcagtacgaacgctggacgctgccgtttgccgtgctc
accgcggtgccgtttgccgtgtttggcgcgctgctggccacctggatgcgcggcctggct
aacgacgtgtacttccaggtagcgctggtcacgctgatcggtctggcggccaagaatgcc
atcctgatcgtggagttcgccgtcatcaagatggaagagggcatgagcctggccgacgcc
gccatcgacgccgccaagctgcgcttccgccccatcgtgatgacctcgctggcctttatt
ctgggttgcgtaccgctggctatttctagcggtgccggctcggccagccgtcacgccatc
ggtaccggcgtgattggcggcatgttggccgcaacctttattgcggcgctgttcatcccg
ctgttcttcaagctgatcatgcagatgtcgcagggcaaggccgccaaacaaggagaaaaa
catgaagtttaa
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