Vogesella sp. XCS3: LCH97_17435
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Entry
LCH97_17435 CDS
T07617
Name
(GenBank) response regulator
Organism
vog
Vogesella sp. XCS3
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
AAA_16
Pkinase
HATPase_c
PK_Tyr_Ser-Thr
HisKA
GAF
GAF_2
Hpt
PAS_9
AAA_22
PAS_8
GAF_3
RIO1
Kdo
Sigma54_activat
Motif
Other DBs
NCBI-ProteinID:
UDM17032
LinkDB
All DBs
Position
complement(3642574..3649539)
Genome browser
AA seq
2321 aa
AA seq
DB search
MITLPAYHPGSLLHDSGTSLIYRSQHRQSGQPVIMKVLRHPQPQAADVARFQAEYACLQR
FAHAGIVQPLALLQHQQHWVMVLEDCGGVALSQLLEQAGQALPPGLVLEMGLQLCDALDC
VHQAQLVHRDINPANIVWNADTHQLQLIDFGLAQPPSYEPPTGQRYEGTLAYSSPEHTGR
TSHTLGYRADYYSLGVTLYQLLSGQLPFDSQDAMELVHSHLARPPDFQLPAFASLPPQLV
AVVQRLLEKHPDRRYQTIALLKNDLQLCRQLLADTQPLADQASWGSQRVQLVLPDNLYGR
APQLAQLVQAFARCRGPHNELVLLGGFAGVGKSALAEALRQPANEQGSFFVAGKCEQYKR
NTPYAAIIQAFQDLLRQLLTLPQSQLAQWSQLLRNALGEQADILCALLPELALLLPAQHV
SPPLPPQEAQHRLHRLLLTLASTFASPYHPLVIFLDDLQWADPATLGLIEQLLASPQARH
ILLLGAYRDNETGTNHPLIHLQSALVQHGVAIQTLTVEPLGQAHISQWLADTLQCPLDSI
SALATLCQHKTRGNPFFLRQFLRSLYDRGLLFYHPAEARWCWQQQALDNTAFTDNVVALM
VDKLRSLPANTQALLQLAATLGNRFTLSQLARIAALPLASARLQLKPALAHELIRPGGHD
NTVEHDDYRFVHDRIQQAAYALYDEAGQRQQHLKVGRSLLAHSTQLQDDLYAILEQLNPA
VALLHDPAEREQLAVLNYKAGKLAQGAAAYPAALHHMQLAQQLLPEYAASDDLRHILLGL
CDAASHCGQFALADSLYPQLQAHSPCVTTQIEGYLVQIHQYLLQGRFDDALQLQRQCLAM
LGISLPATLAEQQAQLHALESELGTAHGLPDSTVLHRLGQMSDHTAQAAMALLFGVSHAA
YLSGQLTLDALAILHMTRLSLTHGHDELSPYAYALYGFTLGQLHQQYAAAEQWGQLALDL
SNKQHQLAIRGNTHFLYASKLGHWQHPLRSLNGYYQEALHWSQESGDLLNEGYILAVRGT
DRIMQGQYLPELLELGEQDLQRLQSHARQDMYDCTRVGSVQPLCCLMGLSYQPHSFDDET
FSEHDFLQHYQHSPLHLAYYHHSKLFTGYLLRSPDAIALTAQLPHIAANVAGQFKVAEAT
FYCGLILARALREQPDHPQQDSWQTTLAGCLASYAGWASLCADNFAARHSLLQAEQARLD
GQHIAAQQHYQQAIEQAAQHGFAHIAAIARESYGDYWLACGQPAIAQLFLQQAWQGYQAW
GASGKASQLQQRYQAKGLQLASAPAEASAPQTVSHSTHTGSDNTSSLDLASILKATRALS
GELSLERVLARLLDIVRENTGAQTARLLLHYQNHWLLEGGDGQRGKPEPVLLDARQHPLL
PLSLLRYVIRTGEALVEGNLAASQRFHADPYVEQHQPGSVLCLPILRKQQVIGVLYLENR
LIQHAFSHDRLTFLRMLTLQALVSIDNARLYDNLERQVQERTARLNQIRLEQQAILDNAL
VGIAFVRDRVFQQCNQGFEQILGYPRGALDKQPTQLAYLSESDYQLTGHLTRSSYLETDM
ALRRQDGSPVWCAISAKLVNPAEPDAGMVVVIMDISARKAAEQAMAESRQRAEDATRTKS
LFLANMSHEIRTPMNAILGMARLALQRDPDLQVGHYLHKILASGEGLLQILNDILDFSKI
EAGKLTLESVPFSLDNILERVADVMVLRIQGKPIEPIYQIAANVPGRLIGDPLRLEQILC
NLASNAAKFTERGQIALSVAVTEQDAHSVTLSFTMQDSGIGIEPALRDQLFHSFTQADGS
VTRRYGGTGLGLAICKQLASLMQGELAVDSQPGRGSSFTLRITLPWQTDTAPDTPLPNRH
VLVVDDHPQARSALGNMLFNLGMKVSEAGDGMAALAKLHQASEQGQPIDLVLLDSQMPGW
SGSDTLQRLRDARLACEPAVVMLIQPYGDNEDELPTGLQGMLAKPPRPASVLTLLQSLAG
HALPAPPDEKQRMAIQLASLSGVAGCRVLLVDDNAINREVVLGMLEDSGLLIDIAENGVD
AVDAVNIGHYDLVLMDIQMPMLDGFAATRQIRANPAHASLPIVALSAHAMVSDHQASLAA
GMNDHLDKPIVPDALIATLLRWLPAHQPRRALQPTPRQGSHNLAQRLQYHFVSSYRQLPA
KLQLLREAGDWAAIEYHTHSLKAAAAYVDAQRLARLASDIDSALRDHQRLAAEALLPELQ
DELDKTLRQLQDSRSAPARSTAQPQTPLEQMRLLQHLQDKLKHADSRADEALAALFDAMP
IDCHEHLINIGKLLDQIEYDQAYRQLQTLIKTLDLPIGSTT
NT seq
6966 nt
NT seq
+upstream
nt +downstream
nt
atgatcacactgcccgcttaccacccaggcagcctgctacacgatagcggcacctcgttg
atctaccgcagccagcaccggcaaagcggccaacctgtcatcatgaaggtgttgcgccac
ccgcagccgcaagccgctgacgtagcgcgcttccaggccgaatacgcctgcctgcagcgt
tttgcccacgccggcatcgtgcagccgctggcgctgctgcagcaccagcaacactgggtg
atggtgctggaagattgcggaggtgtggcgctaagccagctactggaacaggcgggccag
gcactgccgcccggcctggtactggaaatgggcctgcagctatgcgatgccctggactgt
gtccatcaggcgcagctggtgcaccgcgacatcaacccggccaatatcgtctggaacgcc
gacacgcaccagctacagctgatcgacttcggcctggcccagccccccagctacgagccg
cctaccggacagcgctacgaaggcacgctggcgtacagctcgcccgagcacaccggccgt
accagccatacgctgggctaccgtgccgactactattcgctgggcgtcaccctgtaccag
ttgctaagcggccagctgccattcgatagccaggatgcgatggagttggtgcatagccac
ctggcacgcccgccggacttccagctgcccgcctttgccagcctgccgccgcagctggtg
gctgtggtgcagcggctactggaaaaacacccggaccgccgctaccagacgattgcccta
ctcaagaatgacctgcagctatgccgccagctgctggccgatacccagccactggccgac
caagccagctggggcagccagcgcgtccaactggtgctgccggataacctttacgggagg
gcgccgcagcttgcccagctagtgcaggcctttgcccgctgccgcggcccgcataacgag
ctggtattgctgggtggcttcgccggcgtgggcaaatcggcactggccgaggcgctacgc
cagccggccaacgagcaaggcagctttttcgtggcgggcaaatgcgagcagtacaagcgc
aacacgccgtacgcggccattatccaggcgttccaagacctgttgcgccagctgctgacc
ctgccgcagagccagctggcacagtggtcgcagctgctacgcaatgcgctgggcgaacag
gccgacatcctgtgcgccctgctgccggagctggccctgctgctgccagcccagcatgtc
agcccgccgctgccaccgcaagaagcacagcaccggttacaccgcttactgctcaccctc
gccagcacttttgccagcccttaccacccgctggtgatctttctggacgacctgcagtgg
gccgacccggccaccctgggcctgatcgaacagctgctggctagcccgcaagcccggcat
atcctgttgctgggcgcctatcgcgataacgaaaccggcaccaaccacccgttgatacac
ctgcaatcggcgctggtacagcacggtgttgccatacaaacgctgacggtggaaccgctg
gggcaagcccacatcagccagtggctggccgacacactgcagtgcccgctagacagcatc
agcgcgctggccacgctatgccagcacaaaacccggggcaacccgtttttcctgcgccag
ttcctgcgcagcctgtacgaccgtggcctgctgttctaccacccggcagaagcgcgctgg
tgctggcagcaacaggccctggacaacaccgcctttaccgacaatgtcgttgccctgatg
gtagacaagctgcgcagcctgccggccaatacccaggcactgctgcaactggccgccaca
ctgggcaaccgttttaccctcagccagctggcccgcattgcggcactgccgctggccagc
gcacgcctgcagctgaaaccggcgctggcacacgagctgatacgccctggcggccacgac
aacaccgtcgagcacgacgactaccgctttgtgcacgatcgcatccagcaagccgcctac
gcgctgtacgacgaagccggccaacgccagcaacacctcaaggttggccgcagcctgctg
gcgcacagcacccagctgcaagacgacctgtacgccattctggaacagctgaacccggcc
gtggctttgctgcacgaccccgccgaacgcgaacagctggccgtgctgaactacaaagcc
ggcaagctggcgcaaggtgctgccgcctaccccgccgccctgcaccatatgcagctggcg
cagcagctgctgccggagtacgccgccagcgacgatctgcgccacatcctgctgggcctg
tgcgacgctgccagccactgcggccagtttgccctggccgacagcctctacccgcagcta
caagcccacagcccctgcgtcaccacgcaaatcgaaggctatctggtacagatacaccag
tacctgctgcaaggccgctttgacgacgccctgcagctgcagcgccagtgtctggccatg
ctgggcatcagcctgcccgccaccctggccgagcagcaagcccagctacacgcgctggaa
agcgagctgggcacagcacacggcctgcccgacagtaccgtgctgcaccgcctgggccag
atgagcgaccacacggcgcaagccgccatggccctgctgtttggcgtgagccacgcggcc
tacttgtctggccagctgaccctggacgccctcgccatcctgcacatgacgcggctatcg
ctcacacacggccatgacgagctatcgccctacgcctacgccctgtacggctttaccctg
ggccagctgcaccagcaatatgcggcggccgagcaatgggggcagctcgccctggacctg
tccaacaagcagcaccagcttgccattcgcggcaatacccactttctgtacgccagcaag
ctggggcactggcagcacccgctacgcagcctgaacggctactaccaggaagccctgcac
tggagccaggaaagcggcgacctgctgaacgaaggctatatcctggcggtacgcggcacc
gaccgcatcatgcagggccagtacctgcccgagctgctggagctgggcgagcaagacctg
cagcgcctgcaaagtcatgcccggcaagacatgtacgactgcacccgcgtcggcagcgtg
cagccgctgtgctgcctgatggggctgagctaccagccacacagcttcgacgacgaaacc
ttcagcgagcacgacttcctgcagcactaccagcacagcccgctacacctggcttactac
catcacagcaagctgtttaccggctacctgctgcgcagccccgacgccatcgcgctgact
gcgcagctgccccatattgcggccaacgttgccggccagttcaaagtggcagaagccacc
ttctactgcggcctgatccttgcccgcgccctgcgcgaacagccagaccacccgcagcag
gacagctggcaaaccaccctggccggctgcctggccagctacgccggctgggccagcctg
tgcgccgacaacttcgccgcgcgccatagcctgctgcaagcagaacaggccaggctggac
gggcagcacatcgcggcacagcagcactaccagcaagccatcgaacaagcggcccagcac
ggctttgcccacatcgccgccatcgcccgcgaaagctatggcgactactggctggcctgt
ggccagcccgccattgcccagctgtttttgcagcaagcctggcagggctaccaggcatgg
ggcgccagcggcaaggccagccagctgcagcagcgctatcaggccaaaggcctgcaactg
gccagcgcaccagccgaagccagcgcgccccaaacggttagccatagcacgcataccggc
agcgacaacaccagctcgctggacctggcgtccattctgaaagcaacccgcgccctgtct
ggcgagctcagcctggagcgggtactggcgcggctgctggacatcgtgcgggaaaacacc
ggtgcccagactgcccgcctgctgctgcactaccagaaccactggttgctggaaggtggc
gatggccagcgcggcaagcccgagccggtactgctggacgcgcggcaacacccgctgctg
ccactgtcgctgctgcgctatgtcatccgcacaggcgaagcgctggtagaaggcaatctg
gccgcctcgcaacgctttcatgccgacccctacgtcgagcaacaccagccgggctcggtg
ctgtgcctgcccatcctgcgcaagcagcaggttatcggcgtgctgtacctggaaaaccgc
ctgattcagcacgcgttcagccacgaccggctcaccttcctgcgcatgcttaccctgcag
gcgctggtgtccatcgacaatgcgcggctgtacgacaacctggagcgccaggtacaggag
cgcaccgcccggctgaaccagatacggctggagcagcaagccattctggacaacgcgctg
gtcggcattgcctttgtgcgcgaccgcgtcttccagcagtgcaaccagggcttcgagcag
atactgggctacccccgtggcgcgctggacaaacagcccacccagctggcctacctcagc
gaaagcgactaccagcttaccggccacctgacacgcagcagctatctggaaaccgacatg
gcgctgcggcgccaggatggcagcccggtgtggtgcgctatcagcgccaagctggtgaac
ccggccgagccggacgccggcatggtggtggtgatcatggatatcagcgcgcgcaaagcg
gcagaacaggccatggccgagtcgcgccagcgcgccgaagacgccacgcgcaccaaatcg
ctgttcctggccaatatgagccacgagatccgcaccccgatgaacgccattctgggcatg
gcccgcctggcgctgcagcgcgacccggacctgcaagtaggccactatctgcacaagatt
ctggccagcggcgaagggctgctgcagatactcaacgacattctggacttctccaagatc
gaagccggcaagctcacgctggaaagcgtgcccttctcgctggacaacattctggaacgc
gtggccgacgtgatggtgctgcgcatccagggcaaacccatcgaacccatctaccagatt
gcggccaacgtgcccggcaggctgatcggcgacccgctgcggctggagcaaatcctgtgc
aacctggccagcaatgccgccaaatttaccgagcgcggccagatcgccctgtcggtagcg
gttaccgagcaagacgcccatagcgtgaccctgagcttcaccatgcaagacagcggtatc
ggcatagagccggcgctgcgcgaccagctgttccactcgtttacccaggccgacggctcg
gtaacgcggcgctacggcggcaccggcctggggctggccatttgcaaacagctggccagc
ctgatgcaaggcgagctggccgtagacagccagcctggccgcggcagcagctttaccctg
cgcatcaccctaccatggcaaaccgataccgcccccgacactccgctgcccaaccgccat
gtgctggtggtagacgaccacccgcaagcacgtagcgccctgggcaatatgctgttcaac
ctgggcatgaaggtcagcgaagccggcgatggcatggctgcactggccaagctccatcag
gccagcgaacaaggccagcccatagacttggtgctgctggatagccagatgccgggctgg
agcggtagcgacaccctgcagcgcctgcgcgatgcccgcctggcgtgcgaaccggccgtg
gtgatgctgatccagccctacggcgacaacgaagacgagctgcccacgggcctgcaaggc
atgctggccaaaccgccacgccctgccagcgtgcttaccctgctgcaaagcctggcaggc
cacgccctgcccgccccgccagatgagaaacagcgcatggccatccagctggccagcctg
tccggcgtagccggctgccgtgttctgctggtagacgacaatgccatcaatcgcgaggtg
gtgctgggcatgctggaagacagcgggctgctgatcgatatcgccgaaaacggggtcgat
gcggtagacgctgtcaatatcggccactacgacctggtgctgatggatatccagatgccc
atgctggacggctttgccgctacccggcaaatacgcgccaacccggcgcacgccagcctg
cccatcgtggcgctgagcgcgcacgccatggtcagcgaccatcaggccagcctggccgcc
ggcatgaacgaccatctggacaaacccatcgtccccgatgccctgattgccaccctgctg
cgctggctacccgcccaccagccacgccgcgcgctgcagcccaccccgcgccagggcagc
cacaacctggcgcaacgcctgcaataccactttgtcagcagctaccgccagctgcctgcc
aagctgcagctactacgcgaagccggggactgggccgccatcgaataccacacgcacagc
ctgaaagccgctgcagcctacgtggatgcacagcgcctggcccggctggcatcggatatc
gacagcgccctgcgcgaccaccagcgcctggccgccgaagccctgctgcccgagctgcaa
gacgagctggataaaaccctgcgccagctacaagacagccgcagcgccccagcgcgcagt
accgcgcagccgcagacgcctctggaacaaatgcggcttttgcaacatttgcaagataaa
ctcaagcacgccgactcccgtgccgatgaagcattagccgcactttttgatgcaatgcct
atagattgccatgagcatttgattaatatcggtaaattactagatcagatagaatatgat
caggcttatcgacagctgcaaacactgatcaagacactggacttgcccatcggaagtacc
acatga
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