Vibrio ostreae: KNV97_10100
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Entry
KNV97_10100 CDS
T08661
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
vos
Vibrio ostreae
Brite
KEGG Orthology (KO) [BR:
vos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vos03400
]
KNV97_10100
DNA repair and recombination proteins [BR:
vos03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
KNV97_10100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
SLFN-g3_helicase
AAA
DZR
AAA_22
zf-tcix
ERCC3_RAD25_C
zf-ribbon_3
Motif
Other DBs
NCBI-ProteinID:
QXO18592
UniProt:
A0A975UBI6
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Position
1:complement(860305..862041)
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AA seq
578 aa
AA seq
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MYTLRPYQADSVKAVIHYFRHNNTPAVIVLPTGAGKSLVIAELARLAKGRVLVLAHVKEL
VEQNHAKYEGYGQKGAIFSAGLGRKETDQQVVFASVQSVVRNLDAFKNQFSLLVIDECHR
VPDDKDSSYQKVITHLLSLNPGMKVLGLTATPYRLGMGWIYQYHTRGLVRSEDARFFRDC
IFELPITYLLDEGFLTPAKLIDAPVLSYDFSQLKPANTGRYKESELDMVIEQSKRATPQI
VEQIIHLAQDKQGVMIFAATVRHAQEILALLPQGQSDIVIGDTPSPERDTIIQRFKQREV
KFLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLSPGKTECLVLDYAGNTY
DLYQPEVGDPKPDSDSEIITIPCPACGFNNNFWGKLDSNGFLLEHFGRRCQGYFTDEETG
EREHCGYRFRAKYCGECGADNDIAARICHECDATLVDPDKKLKEALNLKDALVFECLEMD
LSVLKDDKGKSQLKVTYRGDNNAQVHEFWSLSTPKQKATFKQRFVRPHLADKHRPFDEAS
PAKVVNNQHRFRPPQFVIARKSGRFWKMRDKIFEDELR
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgtatacacttcgcccctatcaagctgactcggtaaaagccgtcattcattattttcgt
cacaacaatacgccagcggttatcgtcctgccgacaggtgccggtaaaagcctggtgatt
gcggaactggctcgtctggccaaaggccgggtattagtgcttgcccatgtcaaagagttg
gttgagcaaaaccacgccaaatatgaaggctatggccagaagggcgctatattttccgcc
ggcctgggccgtaaagaaaccgatcagcaggtggtgtttgcgtccgtgcagtctgtggtg
cgcaacctggatgcgtttaaaaatcagttttcgttgctggtgattgatgagtgtcaccgt
gtcccggatgacaaagacagcagttatcaaaaagtcatcacccacttactcagcctcaat
ccgggtatgaaagtgttgggactgaccgccaccccttaccgtttaggcatgggctggatc
taccagtatcacacccgcggcctggtgcgcagtgaagacgcgcgcttttttcgcgactgt
atttttgaactgccgatcacttatctgctcgatgagggattcctcaccccggccaaattg
attgacgcgccggtactgagttacgacttttctcaattgaagccagcgaataccggccgc
tataaagagtcagaactggatatggtgattgagcaatccaaacgggcaacaccacaaatt
gtggagcaaatcattcacctcgcccaagacaaacaaggcgtgatgatatttgcggcgacc
gtgcgtcacgcgcaggaaattctcgccttactgccacaaggacagtccgacatcgtgatt
ggtgatacgccctcaccggaacgtgacaccattattcaacgctttaaacagcgtgaagta
aaatttctggttaacgtgtctgtcctgacaaccggttttgacgctccgcacgttgacctg
attgcgatcctgcgtccgaccgagtcagtcagcctttatcagcaaatcgtcgggcgcgga
ctgcgtctgtcaccgggtaaaaccgaatgtctggtattagactatgctggcaacacttac
gatttgtatcagcctgaggtcggcgatccgaaaccggattcagacagtgaaatcatcact
attccctgcccggcatgcggcttcaataataatttctggggtaagctcgacagcaacggc
tttctgcttgaacattttggccgccgttgccaaggctactttaccgatgaagagaccggc
gagcgggaacattgtggctaccgtttccgtgccaaatattgtggcgagtgcggcgctgat
aatgacatcgccgcacgcatctgccatgagtgtgacgcgaccctggttgatccggacaaa
aagcttaaagaagcgctcaatctgaaagatgcgctggtgttcgaatgcctggaaatggac
ttatcagtacttaaagacgacaaaggcaagtcccaactgaaagtcacctaccgcggagac
aacaacgcccaagtgcatgaattttggtcattaagtaccccgaaacaaaaagcaaccttt
aaacagcgttttgtgcgtcctcatctggcagacaaacatcgtccgtttgacgaagcatcg
ccggccaaagtggtcaacaaccagcatcgcttccgcccgccgcagtttgtcatcgcgcgc
aagtccggtcgtttctggaaaatgcgcgataaaatttttgaagatgaactgcgttga
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