Vibrio owensii: A9237_01860
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Entry
A9237_01860 CDS
T04844
Name
(GenBank) ATP-dependent helicase
KO
K19789
DNA repair protein RadD
Organism
vow
Vibrio owensii
Brite
KEGG Orthology (KO) [BR:
vow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vow03400
]
A9237_01860
DNA repair and recombination proteins [BR:
vow03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
A9237_01860
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_22
SLFN-g3_helicase
DZR
zf-tcix
ERCC3_RAD25_C
AAA_30
TniB
FAD_binding_4
zf-ribbon_3
Motif
Other DBs
NCBI-ProteinID:
AQW56927
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Position
1:429746..431500
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AA seq
584 aa
AA seq
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MYTLRPYQADSVKAVIHYFRKHSTPAVIVLPTGAGKSLVIAELARLAKGRVLVLAHVKEL
VEQNHAKYEGYGLKGSIFSAGLGRKETDQQVVFASVQSVVRNLDSFKNQFSLLVIDECHR
VPDEKTSSYQKVITHLRELNPGIKVLGLTATPYRLSMGWIYQYHTRGQVRTEESRFFRDC
IFELPIRYLLDENFLTPARMMDAPVLSYDFSQLKPANTGRYKEAEMDMVIDKAKRATPQI
VEQIIQYANERKGVMVFAATVRHAQEIHGLLPKGETAIVIGDTPTPERDAIIQSFKNREI
KYLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLSEGKSECLVLDYAGNSY
DLYQPEVGDPKPDSTSEIITIPCPACGFNNNFWGKLDSNGFLLEHFGRRCQGYFEDDETG
EREHCGYRFRAKYCGECGADNDIAARICHECDATLVDPDKKLKEALNLKDALIFECTEMD
LSVFKSSDGKSQLKVTYSGETYQGEGNALVHEFWSLNTKKQKQTFKDQFVRPHLADKHRP
FEEASPTKVVANQHRFRLPQFVIARKSGRFWKLRDKIFEDELKQ
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgtacacccttcgaccataccaagccgactcagtaaaagcggtgattcactattttcgt
aaacactccacaccagcggtcattgtgctgcctacaggtgcggggaaaagcttggtcatt
gcagagttagcaaggcttgccaaaggtcgagtattggtacttgctcacgtaaaagaattg
gtggaacagaatcacgccaagtacgaaggctatggactgaaaggctcaatattttcagcg
gggcttgggcgaaaagaaaccgaccaacaagtggtgtttgcgtcggtgcaatctgtggtg
cgtaatctggactccttcaagaaccagttttctttgctcgttattgatgaatgccaccgt
gtacccgatgaaaaaaccagtagctatcaaaaagtcattactcacctgagagagcttaac
ccgggcattaaagttttgggcttaaccgcaacaccatatcgcttaagtatgggttggatt
taccagtatcacacccgtgggcaggttcgcactgaagaatcacgctttttccgtgactgt
atcttcgagctccctatccgttacttgctggatgaaaacttcttaacaccagcacgtatg
atggatgcgcccgtcttgtcttatgacttctcgcagctaaaaccggctaacacaggtcga
tacaaagaagcggaaatggacatggtgatcgacaaagccaaacgtgcgacgccgcaaatc
gttgaacaaatcattcaatacgctaacgaacgtaaaggtgtgatggtatttgccgccacg
gttcgccatgctcaagaaatccatggattactgcctaaaggtgaaaccgcgatagtgatt
ggtgacacgccaacacctgagcgcgatgccattattcagtcgttcaagaatcgtgagata
aagtacttggttaacgtgtccgttttaaccacaggcttcgacgcgccacatgtggattta
atcgcgattctgcgcccaaccgagtcggtcagtttgtatcaacaaattgttggtcgtggt
ttgcgtctgtcggaaggcaaatctgaatgtttagttctggattacgctggcaacagctat
gacttatatcaacctgaagtgggcgaccctaagcccgattccaccagcgaaattatcacc
attccttgtcctgcttgcggctttaataacaacttctggggaaagttagacagcaacggc
tttttgcttgagcactttggtcgtcgctgccaaggatattttgaagatgatgaaaccgga
gagcgtgaacactgtggttatcgctttagagcgaaatactgcggggaatgtggcgctgat
aacgacattgcggcgcgtatttgtcatgaatgcgatgccacccttgtcgatccagacaaa
aaactcaaagaagcattaaacctgaaagatgcactgatcttcgaatgtacagaaatggat
ttgtcggtgtttaagtccagtgacggtaagtcacaactaaaagtgacatactctggtgaa
acctatcaaggtgaagggaacgcattggtgcatgagttctggtcactgaataccaaaaaa
cagaagcaaaccttcaaagaccagtttgtgcgccctcaccttgccgacaaacatcgccca
tttgaagaagcatcaccaacgaaagtggtggcaaaccaacatcgtttccgtttgcctcaa
tttgtgattgctcgtaaatcaggtcgtttctggaagcttcgtgataagatcttcgaagac
gaactcaagcagtaa
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