Vibrio parahaemolyticus RIMD 2210633: VP0229
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Entry
VP0229 CDS
T00120
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa00521
Streptomycin biosynthesis
vpa00523
Polyketide sugar unit biosynthesis
vpa00541
O-Antigen nucleotide sugar biosynthesis
vpa01100
Metabolic pathways
vpa01110
Biosynthesis of secondary metabolites
vpa01250
Biosynthesis of nucleotide sugars
Module
vpa_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
VP0229
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
VP0229
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
VP0229
Enzymes [BR:
vpa01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
VP0229
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
BAC58492
UniProt:
Q87T41
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Position
1:242226..242789
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AA seq
187 aa
AA seq
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MKVITTEIEGLLVVEPKVFGDSRGFFLESWNKLKFDEATGMEVSFVQDNHSKSESGTLRG
LHIQTKNAQGKLVRVVKGAVYDVAVDLRKDSKTYGKWFGLILSAENKKQLWIPKGFAHGF
LALEDDTEFLYKCDGYYDPLYEVSIDWNDKALAIDWGQFESFKTLKLSDKDSKGIGLSEF
STLEKEF
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgataactactgaaatagaaggtttattagttgttgagcctaaagtctttggt
gactctagaggttttttcctcgaaagttggaataaattaaagtttgacgaagcgactggt
atggaagttagttttgttcaagacaatcactcgaagtcagaaagtgggacattgagagga
ttgcatattcaaacaaaaaatgcccaaggaaaattagttcgagtggtaaagggggcggta
tatgacgttgctgtagatttgagaaaagattcaaagacatatggaaagtggtttggacta
attctctcagctgaaaacaaaaagcagttatggatacctaaaggatttgcgcacggcttc
ttagcattagaagatgatacagagtttctttacaagtgtgatggttattacgatcctctc
tacgaggtttccattgactggaatgataaagcgttggcaattgattggggtcagttcgaa
tcttttaaaactctaaagctgtcggataaagactctaagggcataggtctatctgagttc
agtacacttgaaaaggaattctaa
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