Vibrio parahaemolyticus RIMD 2210633: VP1092
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Entry
VP1092 CDS
T00120
Name
(GenBank) acridine efflux pump
KO
K18138
multidrug efflux pump
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa01501
beta-Lactam resistance
vpa01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VP1092
01503 Cationic antimicrobial peptide (CAMP) resistance
VP1092
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpa02000
]
VP1092
01504 Antimicrobial resistance genes [BR:
vpa01504
]
VP1092
Transporters [BR:
vpa02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
VP1092
Antimicrobial resistance genes [BR:
vpa01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
VP1092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
BAC59355
UniProt:
Q87QQ7
LinkDB
All DBs
Position
1:1147285..1150446
Genome browser
AA seq
1053 aa
AA seq
DB search
MARFFIDRPVFAWVLAILTMLAGIMSLFNLPVSQYPTISPTTITISARYPGASAKTVEDS
VTQVIEQNMTGLDYLRYLSSSSDAFGNATITLTFDSEADPDIAQVQVQNKLQLALTSLPM
EVQSQGIVVNKSNTSFLMVVAVYSDDPDFTQNDIADFVVTNIQDPISRVTGVGQVQAFGS
QYAMRVWLDPFKLTQFNLTAIDVANAISEQNAQVSSGQLGAAPAQKGQLLNATISSASRL
SSVAEFQNIILKSDASGANVYLRDVARIERGAESYDIQGQYNGLPASGLGISLGTGANAL
ETAAAVKERLAELSENFPDGLKVAYPFETTPFVEASIQEVVKTLLEAIVLVFLIMYLFLQ
NFRATIIPTIAVPVVLLGTFAILYATGFSVNTLTMFAMVLAIGLLVDDAIVVVENVERVM
HEDGLDPKEATKKSMGQITGALIGVGLTLSAVFVPMAFMSGSTGVIYRQFSITIVAAMTL
SVMVAIILTPALCATLLKKGDAEFTDKKGFFGWFNRKFDSMTAGYEAGVAKLLKRTGRML
LVFVAMSAGAGWLFMNLPTSFLPDEDQGTVFSMAILPPNSTQEQTEKTLDKVRSYFLEEE
KDNVRSVFTVAGFSFAGQGQNMGMAFIGLKDWSEREAPGSDAASLTGRAMGYFSTIKEAM
VFAFAPPAIQELGNATGFDFYLQDSLSLGHEALVAAQGQLLGMAAQNPKLVGVRPNGQSD
APMYQVHVDHVKLRALDVSINDVNQILSAAWGGAYINDYIDRGRVKKVMVQSDAEFRMQP
EDFNSWYVRNAQGEMVPFSAFASGEWTYGSPQLQRFNGLAAMNIQGGAAPGVSTGEAMAE
IEAMVEQLPEGFTVNWNGISYEERLSGNQAPMLYALSILVVFLVLAALYESWSVPLAVVL
VVPLGVLGAVLAVLGRGMDNDVFFQVSLLTTVGLATKNAILIVEFAKEYYEKGAGLIEAT
LHAVRVRLRPIIMTSLAFGLGVVPLAISAGVGSAGQNAVGTGVLGGMISATLLGIFFVPV
FFVVVERLFDRRAQKEAQKERSQELAPATEKSE
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atggctcgattttttattgatcgtccggtttttgcttgggtactggcgattctgaccatg
cttgcagggatcatgtccttgttcaacttgccagtgtcgcaatatccaaccatttcgccg
accacgatcaccatcagcgcgcgctatcctggtgcttctgctaaaacggtggaggactct
gtcactcaggttatcgagcaaaacatgacaggtctggattacctacgttacttgtcttcg
agcagtgacgctttcggcaatgcgaccattacactgacttttgatagcgaagccgatcct
gatatcgcgcaggttcaagtgcagaacaaactgcaattggcgttgacttcgcttcctatg
gaagtgcaaagccaaggtattgtggtgaacaaatctaacacctcatttttgatggtggtg
gcggtttattctgacgatccagactttacacaaaacgacattgccgactttgttgtaacc
aacattcaagacccaatcagccgtgtgacgggtgtgggtcaagtacaggcttttggttct
caatatgcgatgcgtgtgtggcttgacccgtttaagctgactcagttcaacctgacggca
attgacgttgcaaatgcgatcagtgagcagaatgcgcaagtgtcatctggtcaattgggt
gcagcacctgcgcagaaaggtcaactgcttaacgcgacgatctcttctgcgagtcgttta
agcagtgtggctgagttccaaaacatcatcttgaaatcagatgcgagcggtgcaaacgtt
tatctaagagacgttgctcgtattgagcgtggagcagaaagttacgatattcaaggtcag
tacaacggtttgccggcgtctggtttaggtatttcacttggtacaggtgcgaacgcgctg
gaaacggcggctgcagtcaaagagcgtttagcagagttgagtgaaaacttcccagatggt
ctgaaagtcgcttatccatttgagacaacaccgtttgtagaagcatcgattcaagaagta
gtgaaaacgctactggaagcgattgtgttggtgttcttaattatgtacctgttcttacag
aacttccgtgcaacgatcatcccgacgattgctgttccggttgtactcttgggtacgttt
gccattctttacgcgacaggtttcagcgtgaataccctgacgatgtttgcgatggttctg
gcgattggtttgctggtggatgacgccatcgttgtggtagaaaacgttgagcgtgtgatg
cacgaagacgggctcgatccaaaagaagcaactaagaaatcgatggggcagatcactggc
gcgttgattggtgttggtttgaccttatcggcagtattcgtcccgatggcatttatgtca
ggttcgaccggggtaatttaccgtcagttctcgatcaccatcgttgctgcgatgacgttg
tcagtgatggttgcgatcatcctgacaccagcgctgtgtgctacgttactgaaaaaaggt
gacgctgaatttacggataaaaaaggcttcttcggttggtttaaccgtaaatttgattcg
atgaccgcaggttatgaggctggtgtagccaagttgctaaaacgcactgggcgcatgttg
ttggtgtttgtggcaatgagcgctggtgcgggttggttatttatgaatctgccgacgtct
ttcctaccagatgaagaccaaggtacggtgttctcgatggcaatcttgccgccgaactcg
actcaagagcagacagaaaaaacactcgataaagtgcgtagctatttcttggaagaagaa
aaagacaacgtgagatccgtgtttaccgtggctggttttagttttgctggtcaaggtcaa
aacatgggtatggcgtttattggcttgaaagattggtctgagcgcgaagcgccgggttcg
gatgctgcatctttgacaggccgtgctatgggttacttctcaaccatcaaagaagccatg
gtatttgcgtttgcacctcctgccatccaagagttgggtaacgcaacgggttttgatttc
tatctacaagactccctgagccttggtcacgaagcattagttgccgcacaagggcaatta
ctgggaatggcagcgcagaatccaaaactagttggtgttcgtccgaatggccaatctgat
gcgccaatgtaccaagtgcatgtagatcacgttaaattgcgcgcgctggatgtcagcatc
aacgacgtgaaccaaatcctatccgccgcttggggtggtgcgtacatcaacgactacatt
gaccgtggtcgcgttaaaaaagtgatggtgcaaagtgacgcagagttccgtatgcagcca
gaagattttaactcgtggtatgtacgtaatgcgcaaggtgaaatggtgccgttttcggcg
tttgcaagtggtgaatggacgtatggttcaccacagcttcaacgctttaatggcctggcc
gcgatgaacattcaaggtggtgcagctccaggtgtcagtacgggtgaagcaatggctgag
attgaagcgatggttgagcagttaccagaaggctttacggtgaactggaacggcatctct
tatgaagagcgtttgtccggcaaccaagctccaatgttgtacgcgttgtccattttggtc
gtgttcctagtacttgctgcgttgtatgaaagctggtctgtaccgcttgcggtcgtgttg
gttgtacctttgggcgtattaggcgctgtgctcgcagtacttggtcgtggaatggacaac
gacgtgttcttccaagtgagtttgttaaccacagtgggtttggcaacgaaaaacgcgatt
ttgatcgttgagttcgcgaaagaatattacgagaaaggtgcaggtctgattgaagctaca
ctgcacgcggtgcgtgtgcgtcttcgtccaatcattatgacgtccttggcgtttggcttg
ggtgtggttccgttggcaatcagtgctggcgtgggctctgctggtcaaaacgcggtaggt
actggtgtgcttggcggcatgatcagtgcgaccttgcttggcatcttctttgttccggtg
ttctttgttgtggtagagcgtttgtttgatcgccgtgctcaaaaagaagcgcagaaagaa
cgatctcaagaactcgctccagcaacggaaaagtcggagtaa
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