Vibrio parahaemolyticus RIMD 2210633: VPA0755
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Entry
VPA0755 CDS
T00120
Name
(GenBank) putative metalloproteinase
KO
K08604
vibriolysin [EC:
3.4.24.25
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa05110
Vibrio cholerae infection
vpa05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VPA0755
09160 Human Diseases
09171 Infectious disease: bacterial
05110 Vibrio cholerae infection
VPA0755
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vpa01002
]
VPA0755
Enzymes [BR:
vpa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.25 vibriolysin
VPA0755
Peptidases and inhibitors [BR:
vpa01002
]
Metallo peptidases
Family M4: thermolysin family
VPA0755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M4
Peptidase_M4_C
PPC
FTP
PepSY
DUF4901
Motif
Other DBs
NCBI-ProteinID:
BAC62098
UniProt:
Q87I51
LinkDB
All DBs
Position
2:785300..787405
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AA seq
701 aa
AA seq
DB search
MDLGSKYQRKLVVGFVLVSPLLVSPSLSAAQLERLEPNHGRVVSLEKQNLAATQNVAKAL
GLKPGNNVQKLKANQDKNGDVHVRYQQTYKGIPIWGKQIVLHRDKQGKIKRFGGTLVHDI
GQDISNTTPQLSLERIRSKVQKPYLDVGYHIEDQQQGLRIYIDDKDVAHLAYEIQFFADS
EQALNPTRPTYLVDAKSGEVLLQYEGLAHAEADGPGGNQKIGFYEYGKEYDPLLVQQSGS
TCIMDTPNIVQTINLDGRTSGSVHTFNCPTNTVKEINGAYSPLNDAHYFGKVVYDMYKDW
LNTAPLTFQLQMRVHYRKRYENAFWNGSSMTFGDGASYFYPLVSLDVSAHEVSHGFTEQN
SNLIYSGQSGGINEAFSDMAGEAAEFYSRGSNDWKVGFDIRKSPTGALRYMDNPPLDGRS
IDHASQYVSGMDVHYSSGVFNKAFYLLAVDYDWGTENTFKAFAHANQNYWTPSATFDSAA
AGVLAAAQDLSLPASDVTAAFAQVGVSTDGGVVEPPSSACDAVSLSNGTSSNIESASTGQ
WHCFTIDVPANGSDLTITTAGSNGDADLYVKLGSAPSLSNYDCRSISSNSNEVCSFATPS
EGTWHIGVYAYSGISNVSVTASYTEQEAPPPSGGVTTQSINNGKTWTAIVTGSGLHDGVW
NNNPSDSCGNDSECSKSGIDKKTGSVSFTLSDGQTFVILKP
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggatctaggatcaaaatatcagcgcaagctcgtagttggctttgtgttggtgtcacca
cttcttgtttcaccttctctctctgccgctcagttggagcgattagagccaaatcatgga
cgtgtggtttctctcgaaaagcaaaaccttgccgcgacccaaaatgtcgccaaagcgctt
ggattaaagccgggcaataatgttcaaaagcttaaagccaaccaagacaaaaatggtgat
gtccacgtccggtatcaacaaacctacaaaggaattccgatctgggggaaacagatcgtt
ttacaccgcgataaacaagggaaaatcaaacgctttggcggtacgttagttcatgatatc
gggcaagacatttctaacacgactcctcagctcagccttgaaagaataagaagcaaagta
caaaagccgtatttggatgttggctatcacatcgaagatcagcaacagggattacgtatt
tatatcgatgacaaagacgttgcgcatttagcctatgagatccagttttttgccgattct
gaacaagcgttaaaccccactagaccaacttatctcgtggatgctaaatccggtgaagtg
ctgttgcagtatgaaggattagctcatgcagaagcagatggcccgggaggcaatcaaaag
attggtttctatgagtatggtaaggaatacgacccgctacttgttcagcagtcggggagc
acttgtatcatggatacgcctaatatcgtccaaaccatcaacctagatggccgaacctca
ggcagtgttcacacctttaattgtccaacgaatacggtcaaagagattaacggcgcgtac
agtccgttaaacgatgcgcactactttggcaaagtggtatacgacatgtacaaagattgg
ttgaatactgctcccttgacgtttcagctgcaaatgcgagtccattaccgcaagcgatat
gaaaatgccttctggaatggatcgagtatgacattcggcgacggagcgagttacttctat
ccgttagtgagtttggatgtctccgcgcatgaggtcagccacgggtttacagagcaaaat
tctaacctgatttattcaggtcaatctggcggtattaatgaagcgttttcggatatggct
ggcgaagcagcggagttctattcccgaggttcaaacgattggaaagtcggatttgatatt
cgtaagtctccaactggcgcattacgttacatggacaaccctccgttagacgggcgctcg
attgaccacgcgtctcaatatgtcagtggtatggatgttcattactctagtggtgtgttt
aacaaggcgttttatctgttagccgtcgattatgattggggcaccgaaaacaccttcaag
gcatttgcccacgcgaaccaaaactattggacaccaagcgcgacgtttgattcagctgcc
gctggcgtattggcggcggcgcaagacttaagcttacctgcgagtgatgtgacggcggct
tttgcccaagttggcgtgtcgacggatggtggtgtcgttgaaccaccttcaagcgcttgt
gatgctgtgtcgttgagtaatgggacatcaagcaatatcgaatctgcttcgacagggcag
tggcactgcttcactattgatgtgccagcaaacggttcagacttaaccatcacgaccgca
ggttcaaatggggatgccgacctctacgttaagttgggcagtgcgccaagtttgtcaaac
tacgattgtcgctctatcagctcgaatagtaacgaagtgtgcagttttgctacgccaagt
gaagggacgtggcatattggggtttacgcgtatagcggtatcagtaacgtgagtgtaacc
gcgagttatacagaacaagaagccccaccaccttctggcggtgtgacaacgcaatccatt
aacaatggcaaaacgtggacggcgattgtcacgggctcaggattgcatgatggagtgtgg
aacaacaaccctagtgattcatgtggcaatgatagcgagtgtagcaaatcgggtattgat
aaaaaaactggttcggtaagcttcacgctgagtgatgggcaaacttttgtcattctcaaa
ccatag
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