Vibrio parahaemolyticus BB22OP: VPBB_A0831
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Entry
VPBB_A0831 CDS
T02409
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
vpb
Vibrio parahaemolyticus BB22OP
Pathway
vpb00470
D-Amino acid metabolism
vpb00550
Peptidoglycan biosynthesis
vpb01100
Metabolic pathways
vpb01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
vpb00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VPBB_A0831
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VPBB_A0831
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
VPBB_A0831
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vpb01011
]
VPBB_A0831
Enzymes [BR:
vpb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
VPBB_A0831
Peptidoglycan biosynthesis and degradation proteins [BR:
vpb01011
]
Precursor biosynthesis
Amino acid ligase
VPBB_A0831
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID:
AGB12205
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Position
2:930588..931577
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AA seq
329 aa
AA seq
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MIKNILLLCGGGSSEHEISLLSANFVEQQLNLIQNVKVTRVEIKNEGWVTDQGELVYLDL
NTKQLCSNESNQTIDFIVPCIHGFPGETGDIQSLFEIAGIPYLGCGPEASSNSFNKITSK
LWYDALDIPNTPYLFLTRNDEHSHRQAEQAFEKWGKVFVKAARQGSSVGCYSVTEKQAIA
KAVNDAFGYSDQVLVEKSVKPRELEVAAYEMNGELHITKPGEVIAPDGAFYSYDEKYSSS
SHSLTEVEAKNLTQEQIDKIRHASETVFKQMNLRHLSRIDFFLTEDNEIYLNEVNTFPGM
TPISMFPKMLQNNGHKFHEFLEDCINSAK
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaaatattcttctattatgcggcggcggctcttctgaacacgaaatttcactg
ttgtcggctaactttgttgaacaacaactaaacctaattcagaacgtcaaagtcactcgc
gtagaaataaaaaatgaaggttgggtcacagatcaaggtgaactggtttaccttgattta
aacaccaaacaattgtgctcgaatgaatccaatcaaacgatcgactttattgtgccttgt
attcacggctttcctggcgagactggtgacattcaatcactattcgaaattgccggtatt
ccatacttaggatgtggaccagaagcaagcagcaacagtttcaataaaatcacatcaaaa
ctttggtacgacgctttagacattccaaatacaccttacttattcctaactcgcaatgat
gaacactctcacagacaagctgaacaagcctttgaaaagtggggaaaagtgtttgttaaa
gcagcacgacaaggttcgtctgttgggtgttacagtgtaacagaaaagcaagctatcgct
aaagcagtaaacgatgcgtttggttattcagatcaagtacttgtagagaaatcggtaaaa
cctcgtgagttagaagtcgcagcttatgaaatgaacggtgaactgcacatcactaagcca
ggtgaagtgatcgcacccgatggtgcattttactcatacgatgaaaaatacagcagctca
agccattcattaacagaagtagaagcgaagaacctgactcaagaacagatcgataagatt
cgtcatgcgtcagaaaccgtattcaaacaaatgaaccttcgtcatttgtctcgcatcgac
tttttccttacggaagataatgaaatttacttgaatgaagtgaatacattcccaggaatg
acgccaatttcaatgttccctaaaatgcttcaaaacaatggtcacaagttccatgagttt
cttgaagattgtattaatagtgcaaagtga
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