Vicugna pacos (alpaca): 102524677
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Entry
102524677 CDS
T08098
Symbol
RBFOX1
Name
(RefSeq) RNA binding protein fox-1 homolog 1
KO
K14946
RNA binding protein fox-1
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vpc03041
]
102524677 (RBFOX1)
Spliceosome [BR:
vpc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
102524677 (RBFOX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Fox-1_C
RRM_5
Motif
Other DBs
NCBI-GeneID:
102524677
NCBI-ProteinID:
XP_031542805
UniProt:
A0A6J3B6V7
LinkDB
All DBs
Position
18
AA seq
447 aa
AA seq
DB search
MLPSQGVLLHPYGVPMIVPAAPYFPGLIQGNQEAAAAPDTMAQPYASAQFAPPQNGIPAE
YTAPHPHPAPEYTGQTTVPEHTLNLYPPAQSHSEQSAADTLSGFLLSFFLCSGISLPFRG
SKGTLERTFGSTQSLFALLLFFQQTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFR
FRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIE
VNNATARVMTNKKTVNPYTNGWKLNPVVGAVYSPEFYAGTVLLCQANQEGSSMYSAPSSL
VYTSAMPGFPYPAATAAAAYRGPPPPDPGLTAVLFTRMDFMVQTFIVVYQEPVYGNKLLQ
GGYAAYRYAQPTPATAAAYSDSYGRVYATDPYHHTLAPAPTYGVGAMNAFAPLTDAKTRS
HADDVGLVLSSLQASIYRGGYNRFAPY
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgttgccttctcaaggagtcctcctgcatccttatggcgtgccaatgatcgttccagca
gccccttacttccccggactgatccagggtaatcaggaagcagccgctgcccctgacacc
atggctcagccttatgcttcggcccagtttgccccccctcagaacggcatccccgcggaa
tacacggcccctcacccccaccccgcgccagagtacacgggccagaccaccgtccccgag
cacacgttaaacctgtaccctcccgcccagtcgcactcggagcagagcgcagcggacacc
ctcagcggttttctcctgtccttcttcctttgttctggcatttccctcccatttagagga
agcaaaggcacattggaacgaaccttcgggtccactcagagcctctttgctttgctcttg
ttctttcagcagacagatgacgcggcacccacggatggccagccccagacacaaccttct
gaaaacacggaaaacaagtcccagcccaagcggctgcatgtctccaacatccccttcagg
ttccgggatcccgacctccgacaaatgtttggtcaatttggtaaaatcttagatgttgaa
attatttttaatgagcgaggctccaagggatttggtttcgtaactttcgaaaatagtgcc
gatgcggacagggcgagggagaaattacacggcaccgtggtagagggccgtaaaatcgag
gtaaataatgccacagcacgtgtaatgacaaataaaaagactgtcaacccttatacaaat
ggctggaaattgaatccagttgtgggtgcagtctacagtcccgaattctatgcaggcacg
gtgctgttgtgccaggcaaaccaggagggatcttccatgtacagtgcccccagttcactt
gtatatacttccgcaatgcccggcttcccgtatccagccgccaccgccgcggccgcctac
cgagggcccccgccccccgatcccggcctaacggcggtgttgtttaccaggatggatttt
atggtgcagacatttatagtagtgtaccaagagcctgtgtatggcaataaattgctccag
ggtggttacgctgcataccgctacgcccaacctacccccgccactgccgctgcctacagt
gacagttacggacgagtttatgctaccgacccctaccaccacacacttgctccagccccc
acctacggcgttggtgccatgaatgcttttgcacccttgactgatgccaagactaggagc
catgctgatgatgtgggtctcgttctttcttcattgcaggctagtatataccgaggggga
tacaaccgttttgctccatactaa
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