Vicugna pacos (alpaca): 102525007
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Entry
102525007 CDS
T08098
Symbol
SCN10A
Name
(RefSeq) sodium channel protein type 10 subunit alpha
KO
K04842
voltage-gated sodium channel type X alpha
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vpc04040
]
102525007 (SCN10A)
Ion channels [BR:
vpc04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
102525007 (SCN10A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
GPHH
CcmD_alt
Na_trans_cytopl
Lustrin_cystein
SLATT_5
IQ
Motif
Other DBs
NCBI-GeneID:
102525007
NCBI-ProteinID:
XP_015091700
UniProt:
A0A6J0ACT5
LinkDB
All DBs
Position
17
AA seq
1835 aa
AA seq
DB search
MEFPFGSPQAPHFRRFTPESLVAIEKRIAAKQAAKKVQEKPKKQKDQEEKSRPQLCLKAC
NKLPKFYGKLPAELVGEPLEDLDPFYSTHRTFMVLNKERTISRFSATRALWLFSPFNLIR
RTAIKVSVHSWFSLFITITILVNCVGMTQNELPEKIEYVFTVIYTFEALIKILARGFCLN
EFTYLRDPWNWLDFSVITLAYICEAIDRRGISGLRTFRVLRALKTVSVIPGLKVIVGALI
HSVRKLADVTILTVFCLSVFALVGLQLFKGNLKNKCVKNCTAVNETANYSSHEKPDFYKN
KPGTSDPLLCGYGSDSGHCPEGYFCLKTSSNPDFNYTSFDSFAWAFLSLFRLMTQDSWER
LYQQTLRASGKMYMVFFVLVIFLGSFYLVNLILAVVTMAYEEQNQATIDETETKEKNFQE
ALKLLRKEQEVLVALGVDTASLQSYNGSPLTSINASERRHILKPRVSEGSTDDNRSLQSE
PYNQHRMSFLGLTSGRRRASHGSVFHFQAIGRDISFPDEVTDVRIFPGDRESHRGSLLLD
RGASQQGPLPGSPLPQTLNPGSGHGENGHPTLPTGELSPGAVEVSALDAGQKTFLTAEYL
DESLRVQRALSVVSVVTSVLEELEESKQRCPPRLTSLAQKYLIWECCPTWVKLKELLFGI
VTDPFAELTITLCIVVNTIFMAMEHYGMSFAFDTMLQTGNIVFTVIFTAEMVFKIIAFDP
YYYFQKRWNIFDCIIVTVSLIELGTARKGSLTVLRTFRLLRVFKLAKSWPTLNTLIKIIG
NSVGALGNLTIILAIIVFVFALVGKQLLGDNYKKNRHKISAPNEDWPRWHMHDFFHSFLI
VFRILCGEWIENMWACMEVGDKSICLILFLTVMVLGNLVVLNLFIALLLNSFSADNLTAP
EEDGEVNKLQVALARIQVFSRRTKEALRSFLSRPCLLPRPKSEPQLVVKLPLSATKAKNH
IAADTAMGSPGGLLAPRGPRDDHSDFITNPNIWVSVPIAEGESDLDELEDDGEEDARSTR
QQVIPQGQQEQLLQVGRHEDHLPPRSPGSGMSSEDLAPNLGEKREDEAAAQGPAEGVDDM
SSSECSTVDCPDPQEILRKIPELADDLDEPDDCFTEGCIRYYPCCKVNVTKFPWTVGWQV
RKTCYHIVEHSWFESFIVFMILLSSGSLAFEDFYLDQKPKVKALLEYTDRVFTFIFVFEM
LLKWMAYGFKSYFTNAWCWLDFLIVNISLTSLIAKMMKYSDMESIKTLRTLRALRPLRAL
SRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFQRCINTTNEDFSLV
PWTTVTNMSECERQNYTGKFFWVNVKVNFDNVAMGYLALLQVATFKGWMDIMYAAVDSRE
VSMQPKWEDNVYMYFYFVIFIIFGGFFTLNLFVGVIIDNFNQQKKKLGGQDIFMTEEQKK
YYNAMKKLGSKKPQKPIPRPLNKYQGFVFDIVTRQTFDIIVMVLICLNMITMMVETDEQS
EEKTKVLNKINQFFVAVFTGECVMKIFALRHYYFTNGWNVFDFIVVILSIMSLVFSAILT
SLGVVNNGVRGDCGNPALGILFFTTYIIISFLIVVNMYIAVILENFNVATEESTEPLSED
DFDMFYETWEKFDPEATQFITFSALSDFADALSGPLRIPKPNCNTLIQMDLPLVPGDKIH
CLDILFAFTKNVLGESGELDSLKSNMEEKFMATNLSKASYEPIATTLRWKQEDISATIIQ
KAYRSYVLHRSLTISNPLGVPRAEEEAVSLPDEGFAAFMPNENGVLPDKSASTSVTSFPP
SYDSVTRGLSDQLNMHTPSSMQNEGDAVSKEASSP
NT seq
5508 nt
NT seq
+upstream
nt +downstream
nt
atggaattcccctttgggtccccgcaagctccccacttccgtcgattcactccagagtcc
ctggtggctattgaaaaacgaattgctgccaagcaggcggcaaagaaagttcaagagaag
cccaagaagcagaaggaccaggaagagaagtctcggccacagctatgcttgaaagcctgc
aacaagctgcccaagttctatggcaagctcccggcagagctggtcggggagcccttggag
gatttggaccccttctacagtacacaccggacatttatggtgctcaacaaagagaggacc
atttcacggtttagtgccactcgggccctgtggttattcagccctttcaacctgatcaga
agaacagccatcaaagtgtctgtccactcgtggttcagtttatttataacaatcactatt
ttggtcaactgtgtgggcatgacccaaaacgaacttccagagaaaatcgaatatgtcttc
actgtcatttatacctttgaagccttgataaagatactggcaagaggattttgtctaaat
gagttcacttacctgcgggatccttggaactggctggattttagtgtcatcaccctggca
tacatatgtgaagcaatagatcgccgagggatctcgggcctgcggacattcagagttctt
agagctttaaagacggtgtctgtgatcccggggctgaaggtcatcgtgggggccctgatc
cactcagtgaggaagctggctgatgtgaccattctcaccgtcttctgcctgagtgtcttt
gccctggtcggcctgcagctcttcaagggcaacctcaagaacaaatgtgtcaagaattgc
acagctgtcaacgagacagccaattattcttctcacgaaaaaccagatttctacaaaaac
aaaccaggcacctctgatcctttactgtgtggctatggatctgattcaggccactgccct
gagggttatttctgccttaaaacatccagcaacccagattttaactacaccagctttgat
tccttcgcttgggctttcctctcattgttccgcctcatgacacaggattcctgggaacgc
ctctaccagcagaccctgagggcttctgggaaaatgtatatggtttttttcgtgcttgtt
atcttcctggggtctttctacctggttaacttgatcttggctgtggtcaccatggcatat
gaggagcagaaccaggcaaccattgatgaaactgaaaccaaggagaagaacttccaagag
gccctcaagttgctccggaaggaacaagaggtgctggtagcactgggggttgacacagcc
tctctccaatcctacaatgggtcacctttaacctccataaatgccagtgagagaaggcat
atactgaagccaagggtgtcagagggctccacagacgacaacagatcactccaatctgag
ccttacaaccagcaccgaatgtctttcctaggcctcacctctggaagacgccgagctagc
catggcagtgtgttccatttccaggccatcggccgagacatctcattccctgatgaggtc
acagatgtcagaatctttcctggagaccgtgaaagccatcggggctctctgctgctggat
aggggtgcaagccagcaaggccccctccctgggagtccactgcctcaaaccctcaaccct
ggctcagggcatggagaaaatggccaccccacattgcccactggtgagctttcccctgga
gccgtcgaagtctcggcactggatgcaggacagaagactttcttaacagcggaatactta
gacgaatctcttcgagttcaaagggcgttgagtgttgtcagtgtcgtgacctccgtcctc
gaggagttggaggagtctaaacagaggtgcccaccccgcttgaccagcttggctcagaag
tatctgatctgggagtgctgccccacctgggtgaaactcaaggaacttctctttgggatt
gtgacggacccctttgcagagctcaccatcaccttgtgcatcgtggtgaacaccatcttc
atggccatggagcactatggcatgagcttcgcctttgacaccatgctccagacaggcaac
attgtctttaccgtgatatttactgctgaaatggtcttcaaaatcatagccttcgaccct
tactattacttccagaagaggtggaacatcttcgactgcatcatcgtcaccgtgagcctg
atagaactgggcacagctaggaaggggagtctgacggtgctgcggaccttccgcctgctg
cgggtcttcaagctggccaagtcctggccaaccttaaacacgctcattaagatcattgga
aactcagtgggtgctctgggaaacctcaccatcatcctggccatcatcgtctttgtcttc
gccctggttggcaaacagctccttggggacaactacaagaaaaaccggcacaaaatctct
gcgcccaacgaagactggccgcgctggcacatgcatgacttcttccactccttcctcatc
gtcttccggatcctctgtggagagtggatcgagaacatgtgggcctgcatggaagtcggt
gataaatccatctgcctcatcctcttcttgactgtgatggttctggggaacctggtggta
cttaacctcttcatcgccctgctcctgaactcttttagcgccgacaacctcacagcccca
gaggaggatggggaggtgaacaagctgcaggtggcccttgcacggatccaggtgtttagc
cgtcgcaccaaggaggcccttcgcagcttcctcagccgaccctgcttgctcccccggccc
aagtcagagccccagctggtggtgaaactcccactgtccgccaccaaagccaagaaccac
attgcagcagacacggccatgggaagtcctggaggactcctggctccccgaggccccagg
gatgaccacagtgatttcatcaccaatcctaacatatgggtctctgtgcccattgccgag
ggtgaatctgatcttgatgaactggaggatgatggtgaggaggatgctcggagcacccgg
cagcaagtgatccctcaagggcagcaggagcagctgctgcaagttgggagacacgaggat
cacctgccgcccaggagcccaggttctgggatgtcctctgaggacctagctccgaaccta
ggtgagaagcgggaagacgaggctgctgcacagggccctgcagagggagtggacgacatg
agctcctcagaatgcagcaccgtggactgcccagatccccaggagatcctgaggaagatc
cccgaactggcagatgacctcgatgaaccagatgactgcttcacagaaggctgcattcgc
tactatccctgctgcaaagtgaacgtcaccaagtttccctggaccgtgggctggcaggtg
cgcaagacctgctaccacatcgtggagcacagctggttcgagagcttcatcgtcttcatg
atcctgctcagcagtggatctctagcctttgaagatttttacctcgaccagaagcccaag
gtgaaggccttgctggagtacaccgacagggtgttcacctttatctttgtgtttgagatg
ctgctcaagtggatggcctatggctttaaaagttacttcaccaatgcctggtgctggctg
gacttcctcatcgtgaatatctcactgacaagccttatagcgaagatgatgaagtattct
gatatggaatccatcaaaacccttcggaccctccgcgccctgcggccactgcgggccctg
tctcgatttgaaggcatgagggtggtggtggatgccctggtgggcgccatcccatccatc
atgaacgtcctcctcgtctgcctcatcttctggctcatcttcagtatcatgggcgtgaac
ctcttcgcggggaagtttcagagatgcatcaacaccaccaatgaagacttttcccttgtg
ccttggactactgtgactaacatgtctgaatgtgaacgtcaaaactacactggaaagttc
ttttgggtcaacgtgaaggtcaactttgataacgttgcaatgggctacctcgcacttctg
caggtggcaacctttaaaggctggatggacatcatgtatgcagctgtggattcccgggag
gtcagcatgcagcccaagtgggaggacaacgtgtacatgtacttctacttcgtcatcttc
atcattttcggtggcttcttcacactcaatctcttcgttggggtcataattgacaacttc
aaccaacagaaaaaaaagttagggggccaggacatcttcatgacagaggagcagaagaag
tactacaatgccatgaagaagctgggctccaagaagccccagaagcccatcccacggcct
ctgaacaagtaccagggttttgtctttgacatcgtgaccaggcagacttttgacatcatc
gtcatggtccttatctgcctcaacatgatcaccatgatggtggagactgatgagcagagt
gaagaaaagacaaaagtcctgaacaaaatcaaccagttctttgtggccgtcttcacgggc
gagtgtgtcatgaagatattcgccttgaggcattattacttcaccaatggctggaatgtg
tttgacttcatcgttgtcatcctctccattatgagcctggtgttttctgcaattcttaca
tcgcttggagtggtcaacaacggcgtcagaggggactgtgggaacccagccttgggcatc
ctcttcttcaccacctacatcatcatctccttcctcattgtggtcaacatgtacatcgcc
gtgattctggagaacttcaatgtggccacggaggagagcacggagcccctgagcgaggat
gactttgacatgttctatgagacttgggaaaagttcgacccagaggccacccagttcatt
accttctctgccctctcagactttgcagacgccctctctggccccctgagaatccccaaa
cctaactgcaacacgttaatccagatggacttgcctttggtccctggagataagatccac
tgtttggacatcctgtttgcctttaccaagaatgtcctgggagaatctggggagttggat
tctttgaagtcaaatatggaggagaaatttatggcaactaatctttcaaaagcatcctat
gaaccaatagcaaccacgctccggtggaagcaagaagacatttcagccactattatccaa
aaggcctatcggagctatgtgctgcaccgctccctgaccatctccaaccctctaggtgta
cccagggctgaggaggaggctgtgtcactcccagatgaaggctttgctgcattcatgcca
aatgaaaatggtgtgctcccagacaaatctgcaagtacatctgtcacatctttcccacca
tcctacgacagtgtcactagaggcctcagtgatcaactcaacatgcacacacctagctca
atgcaaaatgaaggtgacgctgtcagtaaggaagccagtagtccctag
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integrated database retrieval system
