Vicugna pacos (alpaca): 102527526
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Entry
102527526 CDS
T08098
Symbol
DDX41
Name
(RefSeq) probable ATP-dependent RNA helicase DDX41
KO
K13116
ATP-dependent RNA helicase DDX41 [EC:
5.6.2.7
]
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
102527526 (DDX41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vpc03041
]
102527526 (DDX41)
Enzymes [BR:
vpc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102527526 (DDX41)
Spliceosome [BR:
vpc03041
]
Complex C
Other components
Complex C specific factors
102527526 (DDX41)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
zf-CCHC
ResIII
UTP25
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
102527526
NCBI-ProteinID:
XP_006198995
UniProt:
A0A6I9I0H8
LinkDB
All DBs
Position
22
AA seq
621 aa
AA seq
DB search
MEDSEPERKRARIDEATAAGSRSEAEDDDEDYVPYVPLRQRRQLLLQKLLQRRRKGAAEE
EQQDSGSEPRGDEDDIPLGPQSNVSLLDQHQHLKEKAEARKESAKEKQLKEEEKILESVA
EGRALMSVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRRKYHILVEGDGIPPPIK
SFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIM
FCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGM
SVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTI
FSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAKM
VYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREG
KKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACD
ESVLMDLKALLLEAKQKVPPVLQVLHCGDESMLDIGGERGCAFCGGLGHRITDCPKLEAM
QTKQVSNIGRKDYLAHSSMDF
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggaggactccgaacccgagcggaagcgggctcgcatcgacgaggcgactgccgccgga
agccgctccgaggcagaggatgatgatgaggactacgtgccctacgtgccgctgcgacag
cgccgacaactgctgcttcagaagctgctgcagcgaaggcgcaagggagctgcggaggag
gagcagcaggacagcgggagcgagccccggggagatgaggacgacatcccgctgggccct
cagtccaacgtcagcctcctggatcagcaccagcacctcaaagagaaggctgaagcccgc
aaggagtctgccaaggagaagcagctgaaggaagaggagaaaatcctggagagtgtggct
gagggtcgagccttgatgtcagtgaaggagatggctaagggaatcacatacgacgacccg
atcaaaactagttggacacccccccgttacgtcctgagcatgtctgaagagcggcatgag
cgtgtacggaggaagtaccacatcttggtagagggagatggtatccccccacccatcaag
agcttcaaggaaatgaaatttcctgcagccatcctgagaggcctgaagaagaaaggcatc
caccacccgacccccattcagatccagggaattcccaccattctgtcgggccgtgacatg
ataggcattgccttcacgggttcaggcaagacgctggtgttcactttgcctgtcatcatg
ttctgcctggaacaggagaagaggctacctttctctaagcgtgaagggccctatggactc
attatctgcccctcgcgggagctggcccggcagacgcacggcatcctggagtattactgc
cgcctactgcaggaggacagctcgccgctcctacgctgtgcgctctgcatcggaggcatg
tctgtcaaagagcagatggagaccatccgacatggcgttcacatgatggtggccacccct
gggcgcctcatggatctgctgcagaagaaaatggtcagcctggacatctgtcgttatctg
gccctggacgaggctgaccgcatgatcgacatgggcttcgagggtgacattcgtaccatc
ttctcctatttcaagggccagcgacagaccctacttttcagtgccaccatgcctaagaag
attcagaactttgccaagagcgccctggtaaagcctgtcacgatcaatgtggggcgagca
ggagctgccagcctggatgtcatccaggaagtggaatacgtgaaagaggaagccaagatg
gtgtacctgctggagtgcctgcagaagacgccgccacccgtgctcatctttgcagagaag
aaggcagatgtggacgccatccacgagtacctgctgctcaagggggtcgaggccgtagcc
atccatgggggcaaagaccaggaggaacggaccaaggccatagaggcattccgggagggc
aaaaaggatgtcctagtggccacagatgtagcctccaagggcctggacttccccgccatc
cagcacgtcatcaattatgatatgcctgaggagatcgagaactacgtgcatcgaatcggc
cgcactgggcgctcagggaacacgggcatcgccaccaccttcatcaacaaggcctgcgac
gagtcagtgctgatggacctcaaagccctgctgctggaggccaagcagaaggttccacct
gtgttgcaggtgctgcactgcggggacgagtccatgctggacattggaggagagcgtggc
tgtgccttctgtgggggcctgggccatcggatcaccgactgccccaaactcgaggctatg
cagacgaagcaggtcagcaacatcggccgcaaggactacctggcccacagctccatggac
ttctga
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