KEGG   Vicugna pacos (alpaca): 102534457
Entry
102534457         CDS       T08098                                 
Symbol
THOC3
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
vpc  Vicugna pacos (alpaca)
Pathway
vpc03013  Nucleocytoplasmic transport
vpc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vpc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102534457 (THOC3)
  09122 Translation
   03013 Nucleocytoplasmic transport
    102534457 (THOC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vpc03019]
    102534457 (THOC3)
   03041 Spliceosome [BR:vpc03041]
    102534457 (THOC3)
Messenger RNA biogenesis [BR:vpc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     102534457 (THOC3)
Spliceosome [BR:vpc03041]
 Complex C
  Other components
   EJC/TREX
    102534457 (THOC3)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    102534457 (THOC3)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 eIF2A RMC1_N NBCH_WD40 PD40 Coatomer_WDAD Nup160 Peptidase_S9_N Cytochrom_D1 DPPIV_N IKI3 DUF359
Other DBs
NCBI-GeneID: 102534457
NCBI-ProteinID: XP_015090448
UniProt: A0A6J0ACV1
LinkDB
Position
22
AA seq 351 aa
MAIPATSMGPSALGQSGPGSMAPWCSVTSGPTRYVLGMQELFRGHSKTREFPAHSAKVHS
VAWSCDGRRLASGSFDKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSNPDLFVTASG
DKTIRIWDVRTTKCIATVNTKGENINICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQ
FKFEVNEISWNNDNNMFFLTNGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGKYFA
TGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASASEDHFIDIAEVETGDK
LWEVQCESPTFTVAWHPKRPLLAFACDDKDGKYDSSREAGTVKLFGLPNDS
NT seq 1056 nt   +upstreamnt  +downstreamnt
atggcgattccggcgacgtccatggggccctcggcgctgggccagagcggtcccggctcg
atggctccctggtgctcagtgaccagcggcccgacgcgctacgtgctggggatgcaggag
ctgttccgcggccacagcaagacgcgcgagttcccggcgcacagcgccaaggtgcactcg
gtggcctggagctgcgacgggcgtcgcctggcctcggggtccttcgacaagacggccagc
gtcttcctgctggagaaggaccggttggtcaaagaaaacaattatcgggggcatggggat
agtgtggatcagctttgttggcatccaagtaaccctgatctgtttgtcaccgcgtctggg
gacaaaaccattcgcatctgggacgtgaggactacgaaatgcattgccaccgtgaacact
aaaggggagaacattaacatctgctggagcccggacgggcagaccattgccgtgggcaac
aaggacgacgtggtgaccttcattgatgccaagacacaccgttccaaagcggaggagcag
ttcaaatttgaggtcaatgagatctcatggaacaatgacaataacatgttcttcctgacg
aatggcaacggctgcatcaacatactcagctacccggagctgaagcccgtgcagtccatc
aacgcccatccttccaactgcatctgtatcaagtttgaccccatggggaagtactttgcc
acgggaagtgcagacgctttggtcagcctctgggatgtagatgagttagtgtgtgttcgg
tgcttttccaggctggattggcctgtgaggaccctcagttttagccacgatgggaaaatg
ctggcatcggcgtcagaagatcatttcatcgacattgctgaagtagagacaggagacaag
ctatgggaggtgcagtgcgagtccccaaccttcaccgtggcttggcaccccaaaaggcct
ctgctggcgtttgcctgtgatgacaaagatgggaaatacgacagcagtcgggaagctgga
actgtgaagctgtttgggctccctaacgactcctga

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