Vicugna pacos (alpaca): 102534457
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Entry
102534457 CDS
T08098
Symbol
THOC3
Name
(RefSeq) THO complex subunit 3
KO
K12880
THO complex subunit 3
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03013
Nucleocytoplasmic transport
vpc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102534457 (THOC3)
09122 Translation
03013 Nucleocytoplasmic transport
102534457 (THOC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpc03019
]
102534457 (THOC3)
03041 Spliceosome [BR:
vpc03041
]
102534457 (THOC3)
Messenger RNA biogenesis [BR:
vpc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
102534457 (THOC3)
Spliceosome [BR:
vpc03041
]
Complex C
Other components
EJC/TREX
102534457 (THOC3)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
102534457 (THOC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
eIF2A
RMC1_N
NBCH_WD40
PD40
Coatomer_WDAD
Nup160
Peptidase_S9_N
Cytochrom_D1
DPPIV_N
IKI3
DUF359
Motif
Other DBs
NCBI-GeneID:
102534457
NCBI-ProteinID:
XP_015090448
UniProt:
A0A6J0ACV1
LinkDB
All DBs
Position
22
AA seq
351 aa
AA seq
DB search
MAIPATSMGPSALGQSGPGSMAPWCSVTSGPTRYVLGMQELFRGHSKTREFPAHSAKVHS
VAWSCDGRRLASGSFDKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSNPDLFVTASG
DKTIRIWDVRTTKCIATVNTKGENINICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQ
FKFEVNEISWNNDNNMFFLTNGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGKYFA
TGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASASEDHFIDIAEVETGDK
LWEVQCESPTFTVAWHPKRPLLAFACDDKDGKYDSSREAGTVKLFGLPNDS
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggcgattccggcgacgtccatggggccctcggcgctgggccagagcggtcccggctcg
atggctccctggtgctcagtgaccagcggcccgacgcgctacgtgctggggatgcaggag
ctgttccgcggccacagcaagacgcgcgagttcccggcgcacagcgccaaggtgcactcg
gtggcctggagctgcgacgggcgtcgcctggcctcggggtccttcgacaagacggccagc
gtcttcctgctggagaaggaccggttggtcaaagaaaacaattatcgggggcatggggat
agtgtggatcagctttgttggcatccaagtaaccctgatctgtttgtcaccgcgtctggg
gacaaaaccattcgcatctgggacgtgaggactacgaaatgcattgccaccgtgaacact
aaaggggagaacattaacatctgctggagcccggacgggcagaccattgccgtgggcaac
aaggacgacgtggtgaccttcattgatgccaagacacaccgttccaaagcggaggagcag
ttcaaatttgaggtcaatgagatctcatggaacaatgacaataacatgttcttcctgacg
aatggcaacggctgcatcaacatactcagctacccggagctgaagcccgtgcagtccatc
aacgcccatccttccaactgcatctgtatcaagtttgaccccatggggaagtactttgcc
acgggaagtgcagacgctttggtcagcctctgggatgtagatgagttagtgtgtgttcgg
tgcttttccaggctggattggcctgtgaggaccctcagttttagccacgatgggaaaatg
ctggcatcggcgtcagaagatcatttcatcgacattgctgaagtagagacaggagacaag
ctatgggaggtgcagtgcgagtccccaaccttcaccgtggcttggcaccccaaaaggcct
ctgctggcgtttgcctgtgatgacaaagatgggaaatacgacagcagtcgggaagctgga
actgtgaagctgtttgggctccctaacgactcctga
DBGET
integrated database retrieval system