Vicugna pacos (alpaca): 102534858
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Entry
102534858 CDS
T08098
Symbol
SMC5
Name
(RefSeq) structural maintenance of chromosomes protein 5 isoform X1
KO
K22803
structural maintenance of chromosomes protein 5
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpc03400
]
102534858 (SMC5)
DNA repair and recombination proteins [BR:
vpc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
102534858 (SMC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_29
AAA_25
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
102534858
NCBI-ProteinID:
XP_031533030
UniProt:
A0A6J3AF30
LinkDB
All DBs
Position
4
AA seq
1125 aa
AA seq
DB search
MATPSRKTSTSSPLASKRALPRDPSSEVPSKKKSSAPQAAPPPPLPLQSSGPFVEGSIVR
IAMENFLTYDICEVSPGPHLNMIIGANGTGKSSIVCAICLGLAGKPAFMGRADKVGFFVK
RGCTKGMVEIELFRTSGNLIITREIDVAKNQSFWFINKKSTTQKVVEEQVAALNIQVGNL
CQFLPQDKVGEFAKLSKIELLEATEKSVGPPEMHRYHCDLKNFREKEKQLETSCKEKTEY
LEKMIQRNERYKQDVERFYERKRHLDLIEMLEAKRPWVEYENVRQEYEEVKLARDRVKEE
VRKLKEGQIPMTHRIEEIERQRYNLEARIKEKAIDIKETSQKCKQKQDIIERKDKQNKPQ
IFLTEVCLPVLVHKIEELQQALTVKQNEEHDRQRRISNTRKMIEDLQNELKTTENCENLQ
PQIDAITNDLRRVQEEKALCEGEIIDKREERKTLEKEKKNVDDHITRFDDLMNQKEDKLR
QRYRDTYAAVLWLRNNRDKFKQRVCEPIMLTINMKDNKNAKYIENHIPPNDLRAFVFESQ
EDMEVFLKEVRDNKKLRVNAVIAPKNSYADKAPSRSLNELKEYGFFSYLRELFDAPDPVM
SYLCCQYHIHEVPVGTERTRERIERVIQETRLKQIYTAEEKYVVKTSFYSNKVISSNTSL
KVAQFLTVTVDLEQRRHLEEQLKEINRKLQAVESGLITLCETNQHLEHKDNELRQKKKDL
LERKTKKRQLEQKISSKLGSLKLMEQDTCNLEEEERKANTKIKEINVQKAKLVTELTNLI
KICTSLHIQKVDLILQNTTVISEKNKLESDYMAASSQLRITEQHFIELDESRQRLLQKCK
ELMKRARQVCNLGAEQTVPQEYQTQVPTIPNGHNSSPPMAFQDLPNTLDEIDALLTEERS
RASCFTGLNPTVVEEYTKREEEIEQLTEELKIKKVELDKYRENISQVKERWLNPLKELVE
KINEKFSNFFSSMQCAGEVDLHTENEEDYDKYGIRIRVKFRSSTQLHELTPHHQSGGERS
VSTMLYLMALQELNRCPFRVVDEINQGMDPINERRVFEMVVNTACKENTSQYFFITPKLL
QNLPYSDKMTVLFVYNGPHMLEPNRWNLKAFQRRRRRITFTQPSQ
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaccgagcaggaaaacgtcgacctcaagccccctggcctccaagagagctctc
ccgagagatccctcgtcggaggtcccgagcaagaaaaagagttcggcccctcaggcggcg
ccgccgccgccactgccgctgcagtcgtccgggcctttcgtggaaggctctatcgtccgc
atcgcgatggagaacttcctaacatatgatatctgtgaagtgtctcctggaccccacttg
aatatgattattggagctaatggaacagggaagtccagcatcgtgtgtgccatttgcctt
ggactagcaggcaaaccagctttcatgggacgggctgataaggttggtttttttgtgaag
agaggatgtaccaaaggcatggttgaaattgaattgttcaggacttctggcaatcttata
atcactcgtgagattgatgtggcaaaaaatcagtccttttggttcatcaacaaaaaatct
acaacccagaaagtagtagaagagcaagttgcagccttaaatattcaagtgggcaatctt
tgccaatttctacctcaggataaagttggagaatttgctaaactcagtaaaattgaactc
cttgaagctactgagaagtcagttggtcctccagaaatgcacagataccactgtgatctc
aaaaacttcagggagaaagaaaaacaactagagacctcatgcaaagagaaaactgaatat
ctggagaaaatgattcagaggaatgaaagatataaacaagatgtggaaaggttctatgaa
cgtaagcgacatttagatttgattgagatgcttgaagcaaaaaggccatgggtggaatat
gaaaatgttcgtcaggaatatgaagaagtaaaactagctcgtgacagagtgaaggaagag
gtcagaaaacttaaagaaggtcagattcctatgacacatcgaattgaagaaattgaaagg
caacgttacaatttggaggctcgaattaaagagaaggcaatagatattaaagagacatct
caaaaatgcaagcaaaagcaagatattatagaaagaaaagataaacagaataaacctcaa
attttcttgacagaagtttgtttgcctgtattagtgcacaagattgaggagcttcagcag
gctttaacagtaaaacagaatgaggagcatgaccgacagaggagaataagtaatacccgc
aaaatgatagaagatctgcagaatgaactgaagaccacagaaaactgtgagaatcttcag
cctcagattgatgccattaccaatgatctgagacgagttcaagaggaaaaggcattatgc
gaaggcgagataattgataagcgagaagagagaaaaactctagagaaggagaaaaagaat
gtggatgatcacattacacgttttgatgatcttatgaatcaaaaggaagataagctgaga
cagagataccgcgatacatatgctgctgttttatggctgagaaataacagagacaaattt
aagcaaagagtctgtgagcccataatgcttacgattaatatgaaagataataaaaacgct
aaatatattgaaaatcatattccaccaaatgacttgagagcttttgtatttgaaagtcaa
gaagatatggaagttttcctcaaagaggttcgtgacaataaaaaattaagagtaaatgct
gttattgctcctaagaattcatatgcagacaaagcaccatcaagatctttgaatgaactc
aaagagtatggatttttttcttatttgcgagagttatttgatgcacctgatcctgtgatg
agttacctctgctgccagtatcacattcacgaagttcctgtaggaactgaaagaaccaga
gaaagaattgaacgggtaatacaagaaacccgattaaagcaaatttatacggcagaagaa
aagtatgtggtgaaaacttctttttattcaaacaaagttatttctagtaacacatcccta
aaggtagcccagtttctcacagtcactgtggatctagagcagagacgacacttagaagaa
cagctaaaggaaattaatagaaaattgcaagcagtagaatcagggttgattactttatgt
gagacaaaccaacatctggagcacaaagataatgaacttcgacaaaagaagaaggatctt
cttgaaagaaaaaccaagaaaagacaactggaacaaaaaattagttccaaactaggaagt
ttaaagcttatggaacaggatacttgcaaccttgaagaggaagagcgaaaagcaaatacc
aaaatcaaagaaataaatgttcaaaaagcaaaacttgttactgaattaacaaatctgata
aagatttgtacttcgttgcatatacaaaaagtagatttaattcttcagaatactacagtg
atctctgagaagaacaaattagaatcagattacatggctgcttcatcacaactacgtatc
acagagcaacatttcattgagctggatgaaagcagacagaggttattgcagaaatgcaag
gaacttatgaagagagccaggcaagtatgtaacctgggtgcagagcagaccgttcctcaa
gaatatcagacacaagtacccaccattccaaatggacacaactcctcaccccccatggct
ttccaagatcttccaaacacattggatgaaattgatgccttattaactgaagaaagatca
agagcttcctgcttcacgggactgaatcctacagttgttgaggaatacacaaaaagagaa
gaggaaatagaacaattaactgaggaactaaagataaagaaagttgaactggataaatat
agggaaaacatttcacaggtaaaagaaaggtggcttaatcctttaaaagagctggtagaa
aaaattaatgaaaaattcagcaacttttttagttccatgcagtgtgctggtgaagttgat
ctccatacagaaaatgaggaagactatgataaatatggaattcgaattagagtcaaattt
cgcagtagtactcaactgcacgaattaactcctcatcatcagagtggaggtgaaagaagc
gtttctaccatgttatacttgatggcacttcaggagcttaacagatgtccattcagagtg
gtcgatgaaatcaatcagggaatggacccgatcaatgaacggagagtgtttgaaatggtt
gtaaatactgcttgtaaagagaacacatctcagtacttctttattacaccaaagctccta
cagaatcttccctattctgacaagatgacagtgttgtttgtctacaatggtcctcatatg
ctggaaccaaaccggtggaacttaaaggctttccagagacggcggcgccgtatcacgttc
actcagccttctcaataa
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