Vicugna pacos (alpaca): 102535030
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Entry
102535030 CDS
T08098
Symbol
TRIM62
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM62 isoform X1
KO
K12030
tripartite motif-containing protein 62 [EC:
2.3.2.27
]
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vpc04121
]
102535030 (TRIM62)
Enzymes [BR:
vpc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102535030 (TRIM62)
Ubiquitin system [BR:
vpc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102535030 (TRIM62)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_6
zf-RING_5
GlgE_dom_N_S
zf-RING_10
KxDL
Ribosomal_L37ae
U-box
zf-ANAPC11
DUF2383
AAA_13
zf-Nse
DUF1664
Fib_alpha
TMEM191C
Phasin
Prominin
DUF4795
DUF2884
CCDC93_CC
Vps39_1
OmpH
TMPIT
CorA
DUF4559
Uso1_p115_C
Motif
Other DBs
NCBI-GeneID:
102535030
NCBI-ProteinID:
XP_006197011
UniProt:
A0A6I9HY79
LinkDB
All DBs
Position
13
AA seq
475 aa
AA seq
DB search
MACSLKDELLCSICLSIYQDPVSLGCEHYFCRRCITEHWVRQEAQGARDCPECRRTFAEP
ALAPSLKLANIVERYSAFPLDAILSARRAARPCQAHDKVKLFCLTDRALLCFFCDEPALH
EQHQVTGIDDAFEELQRELKEQLQALQDSEREHTEALQLLKRQLAETKSSTKSLRTTIGE
AFERLHRLLRERQKAMLEELEADTARTLTDIEQKVQRYSQQLRKVQEGAQILQERLAETD
RHTFLAGVASLSERLKGKIHETNLTYEDFPTSKYTGPLQYTIWKSLFQDIHPVPAALTLD
PGTAHQRLILSDDCTIVAYGNLHPQPLQDSPKRFDVEVSVLGSEAFSGGVHYWEVVVAEK
TQWVIGLAHEAASRKGSIQIQPSRGFYCIVMHDGNQYSACTEPWTRLNVRDKLDKVGVFL
DYDQGLLIFYNADDMSWLYTFREKFPGKLCSYFSPGQSHANGKNVQPLRINTVRI
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgcagcctcaaggacgagctgctctgctccatctgtctgagcatctaccaggac
ccggtgagcctgggctgcgagcactacttctgccgccgctgcatcaccgagcactgggtg
aggcaggaggcgcagggcgcccgtgactgccccgagtgccggcgcacgtttgccgagccc
gcgctcgcgcccagcctcaagctggccaacatcgtggagcgctacagcgccttcccgctg
gacgccatcctcagcgcgcgccgcgccgcgagaccatgccaggcacacgacaaggtcaag
ctcttctgcctcacggaccgcgcgctgctctgcttcttctgcgacgaacccgcgctgcac
gagcagcaccaggtcaccggcatcgacgatgccttcgaggagctgcagagggagctgaag
gagcagcttcaggcccttcaggacagtgaacgggagcacacggaggccctgcagctgctc
aaacgacagctggcagagaccaagtcttccactaaaagcctgcggaccaccattggggag
gccttcgagcgactgcaccggctgctgcgggagcggcagaaggccatgctggaggagctg
gaggcagacacggcccgcacgctgaccgacatcgagcagaaagtccagcgttacagccag
cagctgcgcaaggtgcaggagggggcccagatcctgcaggagcggctggccgaaaccgac
cggcacaccttcctggccggggtggcctcgttatctgagcggctcaaagggaaaatccat
gagaccaatctgacctatgaagacttcccaacctccaagtacacaggccccctgcagtac
accatctggaagtccctgttccaggacatccacccagtgccagctgccctgaccctggac
ccgggcaccgcccaccagcgcttgatcctgtccgacgactgcaccatcgtggcctatggc
aacctgcacccacagcccctgcaggactcaccaaagcgcttcgacgtggaggtgtcggtg
ctgggctccgaggccttcagtggtggcgtccactactgggaggtggtggtggcagagaag
acacagtgggtgatcgggctggcccacgaggccgccagccgcaagggcagcatccagatc
cagcctagccgcggcttctactgcatcgtcatgcacgatggcaaccagtacagcgcctgc
accgagccctggacgcggctcaacgtccgcgacaagctcgacaaggtgggtgtcttcctg
gactacgaccaaggcctgctcatcttctacaacgccgatgacatgtcttggctctacacc
ttccgtgagaagttccccggcaagctatgctcctacttcagcccggggcagagccatgcc
aacggcaagaacgtgcagccgctgcggatcaacaccgtccgcatctag
DBGET
integrated database retrieval system
