Variovorax paradoxus B4: VAPA_1c05300
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Entry
VAPA_1c05300 CDS
T02835
Symbol
glcB
Name
(GenBank) malate synthase G GlcB
KO
K01638
malate synthase [EC:
2.3.3.9
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00620
Pyruvate metabolism
vpd00630
Glyoxylate and dicarboxylate metabolism
vpd01100
Metabolic pathways
vpd01110
Biosynthesis of secondary metabolites
vpd01120
Microbial metabolism in diverse environments
vpd01200
Carbon metabolism
Module
vpd_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
VAPA_1c05300 (glcB)
00630 Glyoxylate and dicarboxylate metabolism
VAPA_1c05300 (glcB)
Enzymes [BR:
vpd01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.9 malate synthase
VAPA_1c05300 (glcB)
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Gene cluster
GFIT
Motif
Pfam:
MS_TIM-barrel
MSG_insertion
MS_C
MS_N
Motif
Other DBs
NCBI-ProteinID:
AGU47660
UniProt:
T1X682
LinkDB
All DBs
Position
1:complement(575756..577930)
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AA seq
724 aa
AA seq
DB search
MTARTTTHGLQVATELHRFIEDKVLPASGVASEVFWQGFDAIVHDLAPKNIALLAERDRL
QTELDAWHKKNPGPIAEMPAYRAFLEKIGYLLPQPKGAKATTANVDSELALQAGPQLVVP
ILNARYALNAANARWGSLYDALYGTDAIPETDGAEKGKGYNPVRGAKVIAFARNVLDQAA
PLENGSHKMATGYSVKDGKLVVALQSSSTGLADPAQFVGYQGDAAAPSSVLLKHNGIHLD
IRIDRSTPIGKGDAAGVSDLVLEAALSTILDLEDSVAVVDAADKVVAYSNWLGIVQGTLT
EEVAKGGKTFTRGLNPDREYTGADGQPVKLHGRSLMFLRNVGHLMTNPAVLYAGGKEIPE
GILDAVVTTTIAMIDLKRKGNSRTGSIYIVKPKMHGPAEVAFASELFGRVEQLLGLPANT
VKLGIMDEERRTSVNLKACIAEAAARVAFINTGFLDRTGDEMHTAMHGGPMIRKGDMKSS
AWIGAYEKNNVLVGLSCGLRGKAQIGKGMWAMPDLMAAMLEQKIAHPKAGANTAWVPSPT
AATLHALHYHQVSVTAVQQELEKIDADAERDNILNALLQVPIAPAANWTEAEKQQEIDNN
VQGILGYVVRWIDQGVGCSKVPDIHNVGLMEDRATLRISSQHIANWLLHGVVTKAQVDET
FQRMAKVVDEQNAGDPVYQPMAGNFATSAAYKAAQDLVFKGIEQPSGYTEPLLHAWRLKV
KGEA
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcccgcaccaccacccacggcctccaggttgcgaccgagcttcatcgcttcatc
gaagacaaggtcctgcccgccagcggcgtggccagcgaggttttctggcaaggcttcgac
gccatcgtccacgacctcgcgccgaagaacatcgcgctgctggccgaacgcgaccgcctg
cagaccgagctcgacgcctggcacaagaagaaccccggcccgatcgccgagatgccggcc
taccgcgccttcctcgagaagatcggctacctgctgccgcagcccaagggcgcgaaggcc
accaccgcgaacgtcgattccgagctcgcgctgcaggctggcccgcagctggtggtgccc
attctcaacgcccgctacgcgctcaacgccgccaatgcgcgctggggttcgctgtacgac
gcgctctatggcaccgatgccattcccgaaaccgatggcgccgaaaagggcaagggctac
aaccccgtgcgcggcgccaaggtcatcgcgttcgcgcgcaacgtgctcgaccaggccgcg
ccgctcgaaaacggttcgcacaagatggcgaccggctacagcgtgaaggacggcaagctc
gtcgtcgcgctgcagagcagcagcaccggcctggccgaccccgcgcagttcgtcggctac
cagggcgatgcggctgcgccatcgtcggtgctgctgaagcacaacggcatccacctcgac
atccgcatcgaccgcagcacgcccatcggcaagggcgacgcggccggcgtcagcgacctg
gtgctcgaagccgcgctctcgacgattctcgatctcgaagactcggtggccgtggtcgat
gcggccgacaaggtggtcgcctattcgaactggctcggcatcgtgcagggcacgctcacc
gaggaagtcgccaagggcggcaagaccttcacgcgcggcctgaaccccgaccgcgaatac
accggcgccgacggccagcccgtgaagctgcacggccgctcgctgatgttcctgcgcaac
gtgggccacctgatgaccaaccccgccgtgctgtatgcgggcggcaaggagatccccgaa
ggcatcctcgacgcggtggtcaccaccaccatcgcgatgatcgacctgaagcgcaagggc
aactcgcgcaccggcagcatctacatcgtcaagcccaagatgcacggcccggccgaagtg
gcctttgcaagcgagctgttcggccgcgtcgagcagctgctcgggctgcccgccaacacc
gtgaagctcggcatcatggacgaggagcgccgcaccagcgtgaacctcaaggcctgcatc
gccgaggccgccgcgcgcgtggccttcatcaacaccggcttcctcgaccgcaccggcgac
gagatgcacaccgccatgcacggcggcccgatgatccgcaagggcgacatgaagtccagc
gcctggatcggcgcctacgaaaagaacaacgtgctggtcggcctctcgtgcggcctgcgc
ggcaaggcacagatcggcaagggcatgtgggccatgcccgacctgatggccgccatgctc
gagcagaagatcgcgcaccccaaggccggcgccaacactgcctgggtgccctcgcccacc
gccgccacgctgcatgcgctgcactaccaccaggtgagcgtcacggccgtgcagcaggag
ctcgagaagatcgacgccgacgcggagcgcgacaacatcctcaatgcactgctgcaggtg
cccatcgcccccgcggccaactggaccgaggccgagaagcagcaggagatcgacaacaac
gtgcagggcatcctcggctacgtggtgcgctggatcgaccagggcgtgggctgctccaag
gtgcccgacatccacaacgtgggcctgatggaagaccgcgccacgctgcgcatctcgagc
cagcacatcgccaactggctgctgcacggcgtggtgaccaaggcgcaggtcgacgagacc
ttccagcgcatggccaaggtggtcgacgagcagaacgcgggcgatccggtgtaccagccg
atggccggaaacttcgcaacctcggccgcgtacaaggccgcgcaggacctggtgttcaag
ggcatcgagcagcccagcggctacaccgaaccgctgctgcatgcgtggcggctgaaggtg
aagggcgaagcctga
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